BGC0000012 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000012 (Alternaria solani)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	T1PKS	1	21,971

BGC0000012 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 21,971 nt. (total: 21,971 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 21,972
Label		BGC0000012

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000012.1	0.67	Polyketide	alternapyrone	Alternaria solani
BGC0001858.1	0.36	Polyketide	alternapyrone B, alternapyrone C, alternapyrone D, alternapyrone E, alternapyrone F	Parastagonospora nodorum SN15
BGC0001969.1	0.29	Terpene	asperterpenoid A	Talaromyces wortmannii
BGC0000631.1	0.28	Terpene	botrydial	Botrytis cinerea B05.10
BGC0001068.1	0.27	Terpene, Polyketide	pyripyropene A	unidentified unclassified sequences.
BGC0001910.1	0.24	Terpene	cyslabdan	Streptomyces cyslabdanicus
BGC0001995.1	0.24	Terpene	heptelidic acid	Aspergillus oryzae RIB40
BGC0001811.1	0.24	Terpene	trichodiene-11-one	Fusarium asiaticum
BGC0001909.1	0.23	Polyketide	strobilurin	Strobilurus tenacellus
BGC0000930.1	0.23	Other	deoxynivalenol	Fusarium graminearum

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000012.1	0.87	Polyketide	alternapyrone	Alternaria solani
BGC0001858.1	0.69	Polyketide	alternapyrone B, alternapyrone C, alternapyrone D, alternapyrone E, alternapyrone F	Parastagonospora nodorum SN15
BGC0001969.1	0.62	Terpene	asperterpenoid A	Talaromyces wortmannii
BGC0000631.1	0.62	Terpene	botrydial	Botrytis cinerea B05.10
BGC0001068.1	0.60	Terpene, Polyketide	pyripyropene A	unidentified unclassified sequences.
BGC0001910.1	0.57	Terpene	cyslabdan	Streptomyces cyslabdanicus
BGC0001995.1	0.57	Terpene	heptelidic acid	Aspergillus oryzae RIB40
BGC0001811.1	0.57	Terpene	trichodiene-11-one	Fusarium asiaticum
BGC0001909.1	0.57	Polyketide	strobilurin	Strobilurus tenacellus
BGC0000930.1	0.57	Other	deoxynivalenol	Fusarium graminearum

Similar known gene clusters

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 21971:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Me-pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

alt5

PKS_AT (582..892): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; Methylmalonyl-CoA: 70.8%; Ethylmalonyl-CoA: 66.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 99.6
Malonyl-CoA: 82.8
Methoxymalonyl-CoA: 80.7
Ethylmalonyl-CoA: 62.1
Benzoyl-CoA: 43.2
Isobutyryl-CoA: 42.1
trans-1,2-CPDA: 25.3
2-Methylbutyryl-CoA: 25.1
Propionyl-CoA: 24.8
inactive: 18.8
fatty_acid: 16.1
3-Methylbutyryl-CoA: 13.1
CHC-CoA: 11.3
Acetyl-CoA: 0.0