BGC0000496: AmfS biosynthetic gene cluster from Streptomyces griseus subsp. griseus NBRC 13350
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 2,822,113 - 2,829,457 nt. (total: 7,345 nt).
This entry is originally from NCBI GenBank AP009493.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
RiPP
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000496
Short description AmfS biosynthetic gene cluster from Streptomyces griseus subsp. griseus NBRC 13350
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • RiPP (Lanthipeptide)
Loci NCBI GenBank: AP009493.1
Compounds
  • AmfS
Species Streptomyces griseus subsp. griseus NBRC 13350 [taxonomy]
References
Chemical products information
AmfS
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • SGR_2393
  • BAG19222.1
  • amfR
2822113 - 2822718 (+) transcriptional regulator
copy AA seq
copy Nt seq
  • SGR_2394
  • BAG19223.1
  • amfA
2822761 - 2824665 (-) membrane translocator
copy AA seq
copy Nt seq
  • SGR_2395
  • BAG19224.1
  • amfB
2824662 - 2826578 (-) membrane translocator
copy AA seq
copy Nt seq
  • SGR_2396
  • BAG19225.1
  • amfS
2826654 - 2826785 (-) AmfS protein
copy AA seq
copy Nt seq
  • SGR_2397
  • BAG19226.1
  • amfT
2826830 - 2829457 (-) AmfT protein
copy AA seq
copy Nt seq
RiPP-specific information
Subclass Lanthipeptide
Cyclic? no
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.