BGC0000564: clostridiolysin S biosynthetic gene cluster from Clostridium botulinum A str. ATCC 3502
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 576,447 - 585,080 nt. (total: 8,634 nt).
This entry is originally from NCBI GenBank AM412317.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
RiPP
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000564
Short description clostridiolysin S biosynthetic gene cluster from Clostridium botulinum A str. ATCC 3502
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: complete
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • RiPP (LAP)
Loci NCBI GenBank: AM412317.1
Compounds
  • clostridiolysin S
Species Clostridium botulinum A str. ATCC 3502 [taxonomy]
References
Chemical products information
clostridiolysin S
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • CBO0486
  • CAL82040.1
  • SagA
576447 - 576629 (+) putative cytolysin
  • Precursor biosynthesis
Sequence-based prediction
copy AA seq
copy Nt seq
  • CBO0487
  • CAL82041.1
  • SagB
576794 - 577750 (+) putative cytolysin-associated protein
copy AA seq
copy Nt seq
  • CBO0488
  • CAL82042.1
  • sagC
577754 - 578836 (+) putative cytolysin-associated protein
copy AA seq
copy Nt seq
  • CBO0489
  • CAL82043.1
  • sagD
578852 - 580210 (+) putative cytolysin-associated protein
copy AA seq
copy Nt seq
  • CBO0490
  • CAL82044.1
  • sagE
580185 - 580823 (+) putative cytolysin-associated protein
copy AA seq
copy Nt seq
  • CBO0491
  • CAL82045.1
  • sagF
580831 - 581559 (+) putative cytolysin-associated protein
copy AA seq
copy Nt seq
  • CBO0492
  • CAL82046.1
  • sagG
581868 - 582800 (+) putative cytolysin ABC transporter, ATP-binding protein
copy AA seq
copy Nt seq
  • CBO0493
  • CAL82047.1
  • sagH
582803 - 583936 (+) putative cytolysin ABC transporter
copy AA seq
copy Nt seq
  • CBO0494
  • CAL82048.1
  • sagI
583938 - 585080 (+) putative cytolysin ABC transporter
copy AA seq
copy Nt seq
RiPP-specific information
Subclass LAP
Cyclic? no
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: TTYNBWNDJR6YSNQQMLZQM46S, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: 3UOU7PODQJXIM6BEPUHHRRA5, no GDPR consent given).
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Remove negative molecular mass
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.