BGC0000580 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000580 (Xanthomonas gardneri ATCC 19865)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	lassopeptide	1	2,854

BGC0000580 - Region 1 - lassopeptide

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Location: 1 - 2,854 nt. (total: 2,854 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG

MIBiG comparison

KnownClusterBlast

Lasso peptides

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 2,855
Label		BGC0000580

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000580.1	1.00	RiPP	xanthomonin I, xanthomonin II	Xanthomonas gardneri ATCC 19865
BGC0000570.1	0.32	RiPP	astexin-1	Asticcacaulis excentricus CB 48
BGC0000576.1	0.26	RiPP	rubrivinodin	Rubrivivax gelatinosus IL144
BGC0000573.1	0.21	RiPP	caulonodin I, caulonodin II	Caulobacter sp. K31
BGC0000572.1	0.20	RiPP	capistruin	Burkholderia thailandensis E444
BGC0001673.1	0.20	RiPP	moomysin	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0001539.1	0.20	RiPP	cattlecin	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0000574.1	0.20	RiPP	caulosegnin I, caulosegnin II, caulosegnin III	Caulobacter segnis ATCC 21756
BGC0000577.1	0.19	RiPP	sphingonodin II	Sphingobium japonicum UT26S
BGC0001786.1	0.19	RiPP	subterisin	Novosphingobium subterraneum

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000580.1	1.00	RiPP	xanthomonin I, xanthomonin II	Xanthomonas gardneri ATCC 19865
BGC0000570.1	0.65	RiPP	astexin-1	Asticcacaulis excentricus CB 48
BGC0000576.1	0.60	RiPP	rubrivinodin	Rubrivivax gelatinosus IL144
BGC0000573.1	0.54	RiPP	caulonodin I, caulonodin II	Caulobacter sp. K31
BGC0000572.1	0.53	RiPP	capistruin	Burkholderia thailandensis E444
BGC0001673.1	0.53	RiPP	moomysin	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0001539.1	0.53	RiPP	cattlecin	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0000574.1	0.52	RiPP	caulosegnin I, caulosegnin II, caulosegnin III	Caulobacter segnis ATCC 21756
BGC0000577.1	0.51	RiPP	sphingonodin II	Sphingobium japonicum UT26S
BGC0001786.1	0.50	RiPP	subterisin	Novosphingobium subterraneum

Similar known gene clusters

No matches found.

Lasso peptide predictions

Lassopeptide(s) for XGA_4058

XGA_4058

Leader:

MNSNDTTHSDASNEITVLGVASTDTK

Full core:

GGPLAGEEIGGFNVPG

Putative macrolactam:

GGPLAGEE

XGA_4058

Cleaved off residues:

ISEE

Lassopeptide(s) for XGA_4059

XGA_4059

Leader:

MDTSNNDARTTALDQDLIVLGVASLDTQ

Full core:

GGPLAGEEMGGITTLG

Putative macrolactam:

GGPLAGEE

XGA_4059

Cleaved off residues:

ISQD

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lasso peptides

Core peptide predictions

XGA_4058 - Class II: Cleavage pHMM score: 9.50; RODEO score: 24; Monoisotopic mass: 1451.7 Da; Molecular weight: 1452.6 Da; Number of bridges: 0
XGA_4059 - Class II: Cleavage pHMM score: 10.60; RODEO score: 23; Monoisotopic mass: 1440.7 Da; Molecular weight: 1441.6 Da; Number of bridges: 0