BGC0000585: microcin C7 biosynthetic gene cluster from Escherichia coli
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 6,458 nt. (total: 6,458 nt).
This entry is originally from NCBI GenBank X57583.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
RiPP
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000585
Short description microcin C7 biosynthetic gene cluster from Escherichia coli
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • RiPP (Microcin)
Loci NCBI GenBank: X57583.1
Compounds
  • microcin C7
Species Escherichia coli [taxonomy]
References
Chemical products information
microcin C7
Copy SMILES
C42H70N18O18P1S1
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • CAA40808.1
  • mccA
203 - 226 (+)
copy AA seq
copy Nt seq
  • CAA40809.1
  • mccB
301 - 1353 (+)
copy AA seq
copy Nt seq
  • CAA40810.1
  • mccC
1350 - 2564 (+)
copy AA seq
copy Nt seq
  • CAA40811.1
  • mccD
2561 - 3364 (+)
copy AA seq
copy Nt seq
  • CAA40812.1
3349 - 3612 (+)
copy AA seq
copy Nt seq
  • CAA40813.1
  • mccE
3552 - 5117 (+)
copy AA seq
copy Nt seq
  • CAA40814.1
  • mccF
5173 - 6207 (-)
copy AA seq
copy Nt seq
RiPP-specific information
Subclass Microcin
Cyclic? no
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
  • Updated compound(s) information (NPAtlas curation)
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.