BGC0000633: carotenoid biosynthetic gene cluster from Streptomyces avermitilis
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 14,304 nt. (total: 14,304 nt).
This entry is originally from NCBI GenBank AB070934.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000633
Short description carotenoid biosynthetic gene cluster from Streptomyces avermitilis
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Terpene
Loci NCBI GenBank: AB070934.1
Compounds
  • carotenoid
Species Streptomyces avermitilis [taxonomy]
References
Chemical products information
carotenoid
Copy SMILES
C46H90O6
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • BAB69138.1
1 - 363 (+) hypothetical protein
copy AA seq
copy Nt seq
  • BAB69139.1
419 - 967 (-) integral membrane protein
copy AA seq
copy Nt seq
  • BAB69140.1
  • crtU
1122 - 2624 (-) phytoene desaturase
copy AA seq
copy Nt seq
  • BAB69141.1
  • crtT
2678 - 3409 (-) methyltransferase
copy AA seq
copy Nt seq
  • BAB69142.1
  • crtY
3453 - 4799 (-) lycopene cyclase
copy AA seq
copy Nt seq
  • BAB69143.1
  • crtE
5061 - 6200 (+) geranylgeranyl pyrophosphase synthase
copy AA seq
copy Nt seq
  • BAB69144.1
  • crtI-1
6197 - 7738 (+) phytoene synthase
copy AA seq
copy Nt seq
  • BAB69145.1
  • crtI-2
7735 - 8763 (+) phytoene synthase
copy AA seq
copy Nt seq
  • BAB69146.1
  • crtV
8760 - 9839 (+) methyltransferase
copy AA seq
copy Nt seq
  • BAB69147.1
10060 - 12159 (-) secreted protein
copy AA seq
copy Nt seq
  • BAB69148.1
12242 - 14284 (-) beta-galactosidase
copy AA seq
copy Nt seq
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.