BGC0000669: marneral biosynthetic gene cluster from Arabidopsis thaliana
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 17,023,646 - 17,058,245 nt. (total: 34,600 nt).
This entry is originally from NCBI GenBank NC_003076.8, but has been modified (see Modifications tab for details).

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Terpene
History
KnownClusterBlast
Modifications
General information about the BGC
MIBiG accession BGC0000669
Short description marneral biosynthetic gene cluster from Arabidopsis thaliana
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: complete
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Terpene (Triterpene/Unknown)
Loci NCBI GenBank: NC_003076.8
Compounds
  • marneral
Species Arabidopsis thaliana [taxonomy]
References
Chemical products information
marneral
Copy SMILES
C30H50O1
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Comment Extra
  • AT5G42580
  • NP_199072.1
  • CYP705A12
17023646 - 17025229 (-) cytochrome P450, family 705, subfamily A, polypeptide 12
  • Tailoring (Unknown)
Sequence-based prediction
copy AA seq
copy Nt seq
  • AT5G42590
  • NP_199073.1
  • CYP71A16
17031217 - 17033640 (-) cytochrome P450 71A16
  • Tailoring (Oxidation)
Other in vivo study
copy AA seq
copy Nt seq
  • AT5G42591
17036673 - 17036780 (+) hypothetical protein
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
copy AA seq
copy Nt seq
  • AT5G42600
  • NP_199074.1
  • MRN1
17053566 - 17057975 (+) marneral synthase
  • Scaffold biosynthesis
Other in vivo study
copy AA seq
copy Nt seq
Terpene-specific information
Carbon count subclass Triterpene
Structural subclass Unknown
Isoprenoid precursor FPP
Terpene synthases/cyclases MRN1
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: ZBSL2G6L6BN4YED7KNAVM754, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Modifications to original record
  • AT5G42591 was added