BGC0000034: candicidin biosynthetic gene cluster from Streptomyces sp. FR-008
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 138,203 nt. (total: 138,203 nt).
This entry is originally from NCBI GenBank AY310323.2.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000034
Short description candicidin biosynthetic gene cluster from Streptomyces sp. FR-008
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
  • PKS (Unknown)
Loci
AY310323.2
via Knock-out studies
Compounds
  • candicidin
Species Streptomyces sp. FR-008 [taxonomy]
References
Chemical products information
candicidin Evidence:
Copy SMILES
C59H84N2O18
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAQ82549.1
  • fscO
574 - 1950 (-) FscO
    copy AA seq
    copy Nt seq
    • AAQ82550.2
    • pabC
    2264 - 3037 (-) PabC
      copy AA seq
      copy Nt seq
      • AAQ82551.1
      • fscRI
      3150 - 3818 (-) FscRI
        copy AA seq
        copy Nt seq
        • AAQ82552.1
        • fscRII
        4377 - 7205 (-) FscRII
          copy AA seq
          copy Nt seq
          • AAQ82553.1
          • fscRIII
          7210 - 10254 (-) FscRIII
            copy AA seq
            copy Nt seq
            • AAQ82554.1
            • fscRIV
            10298 - 13315 (-) FscRIV
              copy AA seq
              copy Nt seq
              • AAQ82555.1
              • fscMI
              13522 - 14898 (+) FscMI
                copy AA seq
                copy Nt seq
                • AAQ82556.1
                • fscMII
                14953 - 16011 (+) FscMII
                  copy AA seq
                  copy Nt seq
                  • AAQ82557.1
                  • fscP
                  16106 - 17287 (+) FscP
                    copy AA seq
                    copy Nt seq
                    • AAQ82558.1
                    • fscFE
                    17334 - 17528 (+) FscFE
                      copy AA seq
                      copy Nt seq
                      • AAQ82559.1
                      • fscTE
                      17556 - 18413 (+) FscTE
                        copy AA seq
                        copy Nt seq
                        • AAQ82560.1
                        • pabAB
                        18610 - 20781 (+) PabAB
                          copy AA seq
                          copy Nt seq
                          • AAQ82561.1
                          • fscA
                          20927 - 26158 (+) FscA
                            copy AA seq
                            copy Nt seq
                            • AAQ82562.1
                            • fscTI
                            26333 - 27340 (+) FscTI
                              copy AA seq
                              copy Nt seq
                              • AAQ82563.1
                              • fscTII
                              27561 - 28280 (+) FscTII
                                copy AA seq
                                copy Nt seq
                                • AAQ82564.1
                                • fscC
                                28983 - 60860 (-) FscC
                                  copy AA seq
                                  copy Nt seq
                                  • AAQ82565.1
                                  • fscB
                                  60962 - 77587 (-) FscB
                                    copy AA seq
                                    copy Nt seq
                                    • AAQ82566.1
                                    • fscF
                                    77983 - 84132 (-) FscF
                                      copy AA seq
                                      copy Nt seq
                                      • AAQ82567.1
                                      • fscE
                                      84170 - 107485 (-) FscE
                                        copy AA seq
                                        copy Nt seq
                                        • AAQ82568.1
                                        • fscD
                                        107496 - 136148 (-) FscD
                                          copy AA seq
                                          copy Nt seq
                                          • AAQ82569.1
                                          • fscMIII
                                          136558 - 137766 (-) FscMIII
                                            copy AA seq
                                            copy Nt seq
                                            Biosynthesis information

                                            Biosynthetic modules

                                            Name
                                            Unk01
                                            Type
                                            nrps-type1
                                            Genes
                                            fscA
                                            Substrates
                                            para-aminobenzoic acid (evidence: Structure-based inference [1])
                                            Integrated Monomers
                                            Domains
                                            adenylation
                                            Annotation changelog

                                            Entry version: 4

                                            Date
                                            Changes
                                            Submitters
                                            Reviewers
                                            Update chemical activity to schema version 2.11
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                            Entry version: 3

                                            Date
                                            Changes
                                            Submitters
                                            Reviewers
                                            Updated bioactivity data
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            Added NRP substrate specificities
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            Fixed biosynthetic classes
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                            Entry version: 2

                                            Date
                                            Changes
                                            Submitters
                                            Reviewers
                                            Migrated from v1.4
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                            Entry version: 1

                                            Date
                                            Changes
                                            Submitters
                                            Reviewers
                                            Submitted
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            Detailed domain annotation
                                            Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                            A domain glossary is available here, and an explanation of the visualisation is available here.
                                            Selected features only
                                            Show module domains
                                            Similar known gene clusters from MIBiG 4.0
                                            Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                            Click on reference genes to show details of similarities to genes within the current region.
                                            Click on an accession to open that entry in the MiBIG database.