BGC0000092: megalomicin A biosynthetic gene cluster from Micromonospora megalomicea subsp. nigra
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 47,981 nt. (total: 47,981 nt).
This entry is originally from NCBI GenBank AF263245.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
NRPS/PKS domains
General information about the BGC
MIBiG accession BGC0000092
Short description megalomicin A biosynthetic gene cluster from Micromonospora megalomicea subsp. nigra
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • PKS (Unknown)
Loci
AF263245.1
via
Compounds
  • megalomicin A
  • megalomicin B
  • megalomicin C1
  • megalomicin C2
Species Micromonospora megalomicea subsp. nigra [taxonomy]
References
Chemical products information
megalomicin A Evidence:
Copy SMILES
C44H80N2O15
Chemical database entries
PubCHEM
megalomicin B Evidence:
Copy SMILES
C46H82N2O16
Chemical database entries
PubCHEM
megalomicin C1 Evidence:
Copy SMILES
C48H84N2O17
Chemical database entries
PubCHEM
megalomicin C2 Evidence:
Copy SMILES
C49H86N2O17
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAG13906.1
  • megT
<1 - 144 (-) TDP-4-keto-6-deoxyglucose-2,3-dehydratase
    copy AA seq
    copy Nt seq
    • AAG13907.1
    • megDVI
    928 - 2061 (+) TDP-4-keto-6-deoxyhexose 3,4-isomerase
      copy AA seq
      copy Nt seq
      • AAG13908.1
      • megDI
      2072 - 3382 (+) TDP-megosamine glycosyltransferase
        copy AA seq
        copy Nt seq
        • AAG13909.1
        • megY
        3462 - 4634 (+) mycarose O-acyltransferase
          copy AA seq
          copy Nt seq
          • AAG13910.1
          • megDII
          4651 - 5775 (+) TDP-3-keto-6-deoxyhexose 3-aminotransaminase
            copy AA seq
            copy Nt seq
            • AAG13912.1
            • megDIII
            5822 - 6595 (+) daunosaminyl-N,N-dimethyltransferase
              copy AA seq
              copy Nt seq
              • AAG13911.1
              • megDIV
              6592 - 7197 (+) TDP-4-keto-6-deoxyhexose 3,5-epimerase
                copy AA seq
                copy Nt seq
                • AAG13913.1
                • megDV
                7220 - 8206 (+) TDP-4-keto-6-deoxyhexose 4-ketoreductase
                  copy AA seq
                  copy Nt seq
                  • AAG13914.1
                  • megDVII
                  8228 - 9220 (-) TDP-4-keto-6-deoxyhexose 2,3-reductase
                    copy AA seq
                    copy Nt seq
                    • AAG13915.1
                    • megBV
                    9226 - 10479 (-) TDP-mycarose glycosyltransferase
                      copy AA seq
                      copy Nt seq
                      • AAG13916.1
                      • megBIV
                      10483 - 11424 (-) TDP-4-keto-6-deoxyhexose 4-ketoreductase
                        copy AA seq
                        copy Nt seq
                        • AAG13917.1
                        • megAI
                        12181 - 22821 (+) megalomicin 6-deoxyerythronolide B synthase 1
                          copy AA seq
                          copy Nt seq
                          • AAG13918.1
                          • megAII
                          22867 - 33555 (+) megalomicin 6-deoxyerythronolide B synthase 2
                            copy AA seq
                            copy Nt seq
                            • AAG13919.1
                            • megAIII
                            33666 - 43271 (+) megalomicin 6-deoxyerythronolide B synthase 3
                              copy AA seq
                              copy Nt seq
                              • AAG13920.1
                              • megCII
                              43268 - 44344 (+) TDP-4-keto-6-deoxyglucose 3,4-isomerase
                                copy AA seq
                                copy Nt seq
                                • AAG13921.1
                                • megCIII
                                44355 - 45623 (+) TDP-desosamine glycosyltransferase
                                  copy AA seq
                                  copy Nt seq
                                  • AAG13922.1
                                  • megBII
                                  45620 - 46591 (+) TDP-4-keto-6-deoxyglucose 2,3 dehydratase
                                    copy AA seq
                                    copy Nt seq
                                    • AAG13923.1
                                    • megH
                                    46660 - 47403 (-) TEII
                                      copy AA seq
                                      copy Nt seq
                                      • AAG13924.1
                                      • megF
                                      47411 - >47979 (-) C-6 hydroxylase
                                        copy AA seq
                                        copy Nt seq
                                        Biosynthesis information

                                        No biosynthesis information available for this record.

                                        Annotation changelog

                                        Entry version: 4

                                        Date
                                        Changes
                                        Submitters
                                        Reviewers
                                        Update chemical activity to schema version 2.11
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                        Entry version: 3

                                        Date
                                        Changes
                                        Submitters
                                        Reviewers
                                        Updated bioactivity data
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                        Entry version: 2

                                        Date
                                        Changes
                                        Submitters
                                        Reviewers
                                        Migrated from v1.4
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        Updated compound(s) information (MIBiG Annotathon)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                        Entry version: 1

                                        Date
                                        Changes
                                        Submitters
                                        Reviewers
                                        Submitted
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                        Similar known clusters from MIBiG 4.0
                                        Shows clusters from the MIBiG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                        Detailed help and explanations are available here.

                                        Click on reference genes to show details of similarities to genes within the current region.
                                        Double click on a reference drawing to reverse the display of the genes.

                                        Click on an accession to open that entry in the MIBiG database.


                                        Location:

                                        Identifier
                                        Identity
                                        Coverage
                                        Detailed domain annotation
                                        Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                        A domain glossary is available here, and an explanation of the visualisation is available here.
                                        Selected features only
                                        Show module domains