BGC0000365: glycopeptidolipid biosynthetic gene cluster from Mycolicibacterium smegmatis MC2 155
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Location: 1 - 67,229 nt. (total: 67,229 nt).
This entry is originally from NCBI GenBank AY439015.3.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
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Gene details
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General
Compounds
Genes
NRP
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000365
Short description glycopeptidolipid biosynthetic gene cluster from Mycolicibacterium smegmatis MC2 155
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP
Loci NCBI GenBank: AY439015.3
Compounds
  • glycopeptidolipid
Species Mycolicibacterium smegmatis MC2 155 [taxonomy]
References
Chemical products information
glycopeptidolipid
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ABB72060.1
  • mmpS4
 1 - 420 (+) MmpS4
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  • ABB72061.1
  • mmpl4a
 417 - 3299 (+) Mmpl4a
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  • ABB72062.1
  • mmpL4b
 3309 - 6293 (+) Mmpl4b
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  • ABB72063.1
  • rv1174c
 6364 - 6702 (-) Rv1174c
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  • ABB72064.1
  • rmlA
 6886 - 7752 (-) RmlA
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  • ABB72065.1
  • gtf3
 8259 - 9527 (+) Gtf3
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  • ABB72066.1
  • rmlB
 9588 - 10718 (+) RmlB
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  • ABB72067.1
  • rmt2
 10793 - 11701 (+) Rmt2
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  • ABB72068.1
  • rmt4
 11953 - 12753 (+) Rmt4
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  • ABB72069.1
  • gtf1
 12787 - 14055 (+) Gtf1
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  • ABB72070.1
  • atf1
 14160 - 15344 (+) Atf1
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  • ABB72071.1
  • rmt3
 15416 - 16306 (+) Rmt3
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  • ABB72072.1
  • gtf2
 16344 - 17597 (-) Gtf2
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  • ABB72073.1
  • fmt
 17800 - 18624 (+) Fmt
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  • AAT01803.2
  • tnpA
 20042 - 21283 (+) TnpA
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  • AAT01804.2
  • tnpR
 21291 - 22031 (-) TnpR
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  • AAT01805.1
  • mbtH
 22295 - 22525 (+) MbtH
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  • AAT01806.1
  • mps1
 22554 - 32849 (+) non-ribosomal peptide synthetase
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  • AAT01807.1
  • mps2
 32846 - 40525 (+) non-ribosomal peptide synthetase
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  • AAT01808.1
  • gap
 40542 - 41360 (+) integral membrane protein
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  • AAT01809.1
  • sap
 41462 - 41872 (+) sigma associated protein
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  • AAT01810.1
  • ecf
 41881 - 43056 (+) extra cytoplasmic sigma factor
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  • AAU04876.1
  • fadE5
 43099 - 44934 (-) acyl-coA-dehydrogenase
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  • AAU04877.1
  • Rv0926c
 45172 - 46260 (+) conserved hypothetical protein
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  • AAU04878.1
  • pks
 46271 - 57229 (-) polyketide synthase
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  • ABC70852.1
  • papA3
 57279 - 58892 (+) PapA3
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  • ABC70853.1
  • mmpL
 58926 - 61934 (+) MmpL
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  • ABC70854.1
  • fadD28
 62044 - 63753 (+) FadD28
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  • ABC70855.1
  • pE
 63815 - 64966 (+) PE
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  • ABC70856.1
 64971 - 65660 (-) Gap-like
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NRP-specific information
Subclass N/A
Cyclic? no
NRP-synthases
Gene Modules
mps1
Module ?
Specificity: phenylalanine
Evidence for specificity:
  • Structure-based inference
Module ?
Specificity: threonine
Evidence for specificity:
  • Structure-based inference
mps2
Module ?
Specificity: alanine
Evidence for specificity:
  • Structure-based inference
Module ?
Specificity: alaninol
Evidence for specificity:
  • Structure-based inference
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Added NRP substrate specificities
Detailed domain annotation
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