BGC0000788: O-antigen biosynthetic gene cluster from Salmonella enterica subsp. salamae serovar Greenside
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Location: 1 - 21,532 nt. (total: 21,532 nt).
This entry is originally from NCBI GenBank AY730594.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
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KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000788
Short description O-antigen biosynthetic gene cluster from Salmonella enterica subsp. salamae serovar Greenside
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Saccharide
Loci NCBI GenBank: AY730594.1
Compounds
  • O-antigen
Species Salmonella enterica subsp. salamae serovar Greenside [taxonomy]
References
Chemical products information
O-antigen
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAV34516.1
  • gne
 205 - 1200 (+) UDP-GlcNAc 4-epimerase
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  • AAV34517.1
  • galF
 1443 - 2336 (+) UDP-glucose pyrophosporylase
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  • AAV34518.1
  • wbdM
 2732 - 3847 (+) glycosyltransferase
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  • AAV34519.1
  • gmd
 3869 - 4987 (+) GDP-mannose dehydratase
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  • AAV34520.1
  • fcl
 5187 - 5903 (+) fucose synthetase
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  • AAV34521.1
  • gmm
 5906 - 6406 (+) GDP-mannose mannosylhydrolase
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  • AAG41692.2
  • manC
 6399 - 7847 (+) mannose-1-P guanosyltransferase
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  • AAG41691.1
  • manB
 7851 - 9233 (+) phosphomannomutase
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  • AAV34522.1
  • wbdN
 9230 - 10096 (+) glycosyltransferase
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  • AAV34523.1
  • wzy
 10108 - 11085 (+) O-antigen polymerase
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  • AAV34524.1
  • wzx
 11106 - 12377 (+) O-antigen flippase
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  • AAV34525.1
  • wbdO
 12371 - 13165 (+) glycosyltransferase
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  • AAV34526.1
  • wbdP
 13368 - 13931 (+) glycosyltransferase
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  • AAV34527.1
  • gnd
 14004 - 15410 (+) 6-phosphogluconate dehydrogenase
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  • AAV34528.1
  • col1
 15527 - 16450 (+) putative GDP-colitose biosynthetic protein
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  • AAV34529.1
  • col2
 16447 - 17613 (+) putative GDP-colitose biosynthetic protein
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  • AAV34530.1
  • ugd
 18691 - 19857 (+) UDP-glucose-6-dehydrogenase
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  • AAV34531.1
  • wzz
 20000 - 20872 (+) O-antigen chain length determinant
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  • AAV34532.1
  • hisI
 21086 - 21355 (+) phosphoribosyl-AMP cyclohydrolase
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Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
Similar known gene clusters
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