BGC0000797: sphingan polysaccharide biosynthetic gene cluster from Sphingomonas sp. S88
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Location: 1 - 28,804 nt. (total: 28,804 nt).
This entry is originally from NCBI GenBank U51197.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
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resistance
TTA codons
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Gene details
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General
Compounds
Genes
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000797
Short description sphingan polysaccharide biosynthetic gene cluster from Sphingomonas sp. S88
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Saccharide
Loci NCBI GenBank: U51197.1
Compounds
  • sphingan polysaccharide
Species Sphingomonas sp. S88 [taxonomy]
References
Chemical products information
sphingan polysaccharide
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAC44055.1
  • spsG
 325 - 1944 (-) unknown
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  • AAC44056.1
  • spsS
 1955 - 3313 (-) unknown
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  • AAC44057.1
  • spsR
 3313 - 5325 (-) unknown
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  • AAC44058.1
  • spsQ
 5526 - 6473 (+) glycosyl transferase
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  • AAC44059.1
  • spsI
 6558 - 7460 (-) unknown
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  • AAC44060.1
  • spsK
 7588 - 8646 (+) glycosyl transferase
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  • AAC44061.1
  • spsL
 8643 - 9509 (+) glycosyl transferase
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  • AAC44062.1
  • spsJ
 9552 - 10940 (-) unknown
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  • AAC44063.1
  • spsF
 11569 - 12867 (+) unknown
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  • AAC44064.1
  • spsD
 12882 - 13787 (+) unknown
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  • AAC44065.1
  • spsC
 13822 - 15165 (+) unknown
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  • AAC44066.1
  • spsE
 15165 - 15872 (+) unknown
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  • AAC44067.1
 15883 - 16764 (+) unknown
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  • AAC44068.1
 16748 - 17446 (+) unknown
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  • AAC44069.1
  • atrD
 17507 - 18901 (-) unknown
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  • AAC44070.1
  • atrB
 18898 - 21084 (-) unknown
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  • AAC44071.1
  • spsB
 21706 - 23118 (+) glucosyl-isoprenylphosphate transferase
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  • AAC44072.1
  • rhsA
 23238 - 24116 (+) glucose-1-phosphate thymidylyltransferase
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  • AAC44073.1
  • rhsC
 24113 - 24679 (+) dTDP-6-deoxy-D-glucose-3,5-epimerase
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  • AAC44074.1
  • rhsB
 24683 - 25744 (+) dTDP-D-glucose-4,6-dehydratase
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  • AAC44075.1
  • rhsD
 25744 - 26610 (+) dTDP-6-deoxy-L-mannose-dehydrogenase
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  • AAC44076.1
 26724 - 27536 (-) unknown
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  • AAC44077.1
 27747 - 28703 (+) unknown
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Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Similar known gene clusters
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