BGC0000991: epothilone biosynthetic gene cluster from Sorangium cellulosum
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 58,733 nt. (total: 58,733 nt).
This entry is originally from NCBI GenBank AF217189.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
NRPS/PKS domains
General information about the BGC
MIBiG accession BGC0000991
Short description epothilone biosynthetic gene cluster from Sorangium cellulosum
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
  • PKS (Unknown)
Loci
AF217189.1
via
Compounds
  • epothilone
Species Sorangium cellulosum [taxonomy]
References
Chemical products information
epothilone Evidence:
Copy SMILES
C27H41N1O6S1
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAF62878.1
<5 - 992 (+) putative transposase
    copy AA seq
    copy Nt seq
    • AAF62879.1
    989 - 1501 (+) putative transposase
      copy AA seq
      copy Nt seq
      • AAF62880.1
      • epoA
      1998 - 6263 (+) EpoA
        copy AA seq
        copy Nt seq
        • AAF62881.1
        • epoB
        6260 - 10492 (+) EpoB
          copy AA seq
          copy Nt seq
          • AAF62882.1
          • epoC
          10639 - 16137 (+) EpoC
            copy AA seq
            copy Nt seq
            • AAF62883.1
            • epoD
            16134 - 37907 (+) epoD
              copy AA seq
              copy Nt seq
              • AAF62884.1
              • epoE
              37912 - 49308 (+) EpoE
                copy AA seq
                copy Nt seq
                • AAF62885.1
                • epoF
                49323 - 56642 (+) EpoF
                  copy AA seq
                  copy Nt seq
                  • AAF62886.1
                  • epoK
                  56757 - 58016 (+) EpoK
                    copy AA seq
                    copy Nt seq
                    • AAF62887.1
                    58194 - 58733 (+) putative membrane protein
                      copy AA seq
                      copy Nt seq
                      Biosynthesis information

                      Biosynthetic modules

                      Name
                      Unk01
                      Type
                      nrps-type1
                      Genes
                      epoB
                      Substrates
                      cysteine (evidence: )
                      Integrated Monomers
                      Domains
                      adenylation
                      Annotation changelog

                      Entry version: 3

                      Date
                      Changes
                      Submitters
                      Reviewers
                      Added NRP substrate specificities
                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                      Entry version: 2

                      Date
                      Changes
                      Submitters
                      Reviewers
                      Migrated from v1.4
                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                      Entry version: 1

                      Date
                      Changes
                      Submitters
                      Reviewers
                      Submitted
                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                      Similar known clusters from MIBiG 4.0
                      Shows clusters from the MIBiG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                      Detailed help and explanations are available here.

                      Click on reference genes to show details of similarities to genes within the current region.
                      Double click on a reference drawing to reverse the display of the genes.

                      Click on an accession to open that entry in the MIBiG database.


                      Location:

                      Identifier
                      Identity
                      Coverage
                      Detailed domain annotation
                      Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                      A domain glossary is available here, and an explanation of the visualisation is available here.
                      Selected features only
                      Show module domains