BGC0001044: sirodesmin PL biosynthetic gene cluster from Leptosphaeria maculans
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 13,885 - 61,960 nt. (total: 48,076 nt).
This entry is originally from NCBI GenBank AY553235.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001044
Short description sirodesmin PL biosynthetic gene cluster from Leptosphaeria maculans
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
Loci
AY553235.1
13885 - 61960
via
Compounds
  • sirodesmin PL
Species Leptosphaeria maculans [taxonomy]
References
Chemical products information
sirodesmin PL Evidence:
Copy SMILES
C20H26N2O8S2
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAS92539.1
  • sirH
13885 - 15208 (-) SirH
    copy AA seq
    copy Nt seq
    • AAS92540.1
    • sirQ
    16247 - 17624 (-) SirQ
      copy AA seq
      copy Nt seq
      • AAS92541.1
      • sirI
      17859 - 19217 (+) SirI
        copy AA seq
        copy Nt seq
        • AAS92542.1
        • sirJ
        19492 - 20988 (+) SirJ
          copy AA seq
          copy Nt seq
          • AAS92543.1
          • sirR
          22244 - 23666 (+) SirR
            copy AA seq
            copy Nt seq
            • AAS92544.1
            • sirB
            24755 - 26753 (-) SirB
              copy AA seq
              copy Nt seq
              • AAS92545.1
              • sirP
              27464 - 34285 (+) SirP
                copy AA seq
                copy Nt seq
                • AAS92546.1
                • sirG
                34508 - 35380 (+) SirG
                  copy AA seq
                  copy Nt seq
                  • AAS92547.1
                  • sirC
                  35962 - 37838 (-) SirC
                    copy AA seq
                    copy Nt seq
                    • AAS92548.1
                    • sirM
                    38262 - 39577 (+) SirM
                      copy AA seq
                      copy Nt seq
                      • AAS92549.1
                      • sirE
                      41016 - 42503 (-) SirE
                        copy AA seq
                        copy Nt seq
                        • AAS92550.1
                        • sirS
                        43832 - 45355 (+) SirS
                          copy AA seq
                          copy Nt seq
                          • AAS92551.1
                          • sirZ
                          45596 - 47295 (-) SirZ
                            copy AA seq
                            copy Nt seq
                            • AAS92552.1
                            • sirA
                            50589 - 54945 (+) SirA
                              copy AA seq
                              copy Nt seq
                              • AAT01502.1
                              • sirN
                              55331 - 56367 (-) SirN
                                copy AA seq
                                copy Nt seq
                                • AAS92553.1
                                • sirO
                                57036 - 58269 (+) SirO
                                  copy AA seq
                                  copy Nt seq
                                  • AAS92554.1
                                  • sirD
                                  58737 - 60134 (-) SirD
                                    copy AA seq
                                    copy Nt seq
                                    • AAS92555.1
                                    • sirT
                                    60918 - 61959 (+) SirT
                                      copy AA seq
                                      copy Nt seq
                                      Biosynthesis information
                                      Annotation changelog

                                      Entry version: next

                                      Date
                                      Changes
                                      Submitters
                                      Reviewers
                                      MIBiG v4 annotathon
                                      • (ID: 4CEPXXFDQQ46VQJXBT4B4AUO)
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                      Entry version: 3

                                      Date
                                      Changes
                                      Submitters
                                      Reviewers
                                      Removed incorrect polyketide class
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                      Entry version: 2

                                      Date
                                      Changes
                                      Submitters
                                      Reviewers
                                      Migrated from v1.4
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      Updated compound(s) information
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                      Entry version: 1

                                      Date
                                      Changes
                                      Submitters
                                      Reviewers
                                      Submitted
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      Detailed domain annotation
                                      Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                      A domain glossary is available here, and an explanation of the visualisation is available here.
                                      Selected features only
                                      Show module domains
                                      Similar known gene clusters from MIBiG 4.0
                                      Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                      Click on reference genes to show details of similarities to genes within the current region.
                                      Click on an accession to open that entry in the MiBIG database.