BGC0001509: anikasin biosynthetic gene cluster from Pseudomonas fluorescens
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 116,447 - 161,212 nt. (total: 44,766 nt).
This entry is originally from NCBI GenBank NZ_LVEJ01000013.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
NRP
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001509
Short description anikasin biosynthetic gene cluster from Pseudomonas fluorescens
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP
Loci NCBI GenBank: NZ_LVEJ01000013.1
Compounds
  • anikasin
Species Pseudomonas fluorescens [taxonomy]
References
Chemical products information
anikasin
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • A8O26_RS13955
  • WP_064118557.1
 116447 - 118405 (-) MacB family efflux pump subunit
copy AA seq
copy Nt seq
  • A8O26_RS13960
  • WP_064118558.1
  • macA
 118408 - 119556 (-) macrolide transporter subunit MacA
copy AA seq
copy Nt seq
  • A8O26_RS13965
  • WP_064118559.1
 119623 - 137451 (-) non-ribosomal peptide synthase/polyketide synthase
copy AA seq
copy Nt seq
  • A8O26_RS13970
  • WP_064118560.1
 137448 - 150464 (-) non-ribosomal peptide synthetase
copy AA seq
copy Nt seq
  • A8O26_RS13975
  • WP_064118561.1
 150721 - 157131 (-) non-ribosomal peptide synthetase
copy AA seq
copy Nt seq
  • A8O26_RS13980
  • WP_064118562.1
 157608 - 158402 (+) helix-turn-helix transcriptional regulator
copy AA seq
copy Nt seq
  • A8O26_RS13985
  • WP_064118563.1
 158577 - 159971 (+) efflux transporter outer membrane subunit
copy AA seq
copy Nt seq
  • A8O26_RS13990
  • WP_008079652.1
 160128 - 160733 (+) SCO family protein
copy AA seq
copy Nt seq
  • A8O26_RS13995
  • WP_064118564.1
 160733 - 161212 (+) copper chaperone PCu(A)C
copy AA seq
copy Nt seq
NRP-specific information
Subclass N/A
Cyclic? no
NRP-synthases
Gene Modules
A8O26_RS13965
Module ?
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
Module ?
Specificity: alanine
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
Module ?
Specificity: threonine
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
Module ?
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
Module ?
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
A8O26_RS13970
Module ?
Specificity: serine
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
Module ?
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
Module ?
Specificity: serine
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
Module ?
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
A8O26_RS13975
Module ?
Specificity: isoleucine
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
Module ?
Specificity: aspartic acid
Evidence for specificity:
  • Structure-based inference
  • Mass spectrometry
Annotation changelog
MIBiG version Submitter Notes
1.4
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Updated bioactivity data
  • Added NRP substrate specificities
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
Show module domains
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.