BGC0002291: efomycin K biosynthetic gene cluster from Streptomyces sp. M56
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 2,039,904 - 2,119,811 nt. (total: 79,908 nt).
This entry is originally from NCBI GenBank CP025018.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
NRPS/PKS domains
General information about the BGC
MIBiG accession BGC0002291
Short description efomycin K biosynthetic gene cluster from Streptomyces sp. M56
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • PKS (Unknown)
Loci
CP025018.1
2046004 - 2109226
via
Compounds
  • efomycin K
  • efomycin L
Species Streptomyces sp. M56 [taxonomy]
References
Chemical products information
efomycin K Evidence:
Copy SMILES
Chemical database entries
NPAtlas
efomycin L Evidence:
Copy SMILES
Chemical database entries
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • CFP59_01540
  • AUA09450.1
  • fpg2
2046004 - 2046870 (-) putative formamidopyrimidine-DNA glycosylase-like protein
    copy AA seq
    copy Nt seq
    • CFP59_01541
    • AUA09451.1
    2047097 - 2048431 (+) Catalase
      copy AA seq
      copy Nt seq
      • CFP59_01542
      • AUA09452.1
      • ccr_1
      2048458 - 2049798 (-) Crotonyl-CoA reductase
        copy AA seq
        copy Nt seq
        • CFP59_01543
        • AUA09453.1
        2049911 - 2051335 (-) NDP-hexose 2,3-dehydratase
          copy AA seq
          copy Nt seq
          • CFP59_01544
          • AUA09454.1
          • gpr_6
          2051329 - 2052315 (-) L-glyceraldehyde 3-phosphate reductase
            copy AA seq
            copy Nt seq
            • CFP59_01545
            • AUA09455.1
            • tal_1
            2052315 - 2053280 (-) dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD(P)(+))
              copy AA seq
              copy Nt seq
              • CFP59_01546
              • AUA09456.1
              • liaR_3
              2053373 - 2054104 (-) Transcriptional regulatory protein LiaR
                copy AA seq
                copy Nt seq
                • CFP59_01547
                • AUA09457.1
                • liaS_1
                2054101 - 2055363 (-) Sensor histidine kinase LiaS
                  copy AA seq
                  copy Nt seq
                  • CFP59_01548
                  • AUA09458.1
                  • yhhJ
                  2055365 - 2056102 (-) Inner membrane transport permease YhhJ
                    copy AA seq
                    copy Nt seq
                    • CFP59_01549
                    • AUA09459.1
                    • drrA_5
                    2056125 - 2057039 (-) Daunorubicin/doxorubicin resistance ATP-binding protein DrrA
                      copy AA seq
                      copy Nt seq
                      • CFP59_01550
                      • AUA09460.1
                      • novW
                      2057201 - 2057797 (-) dTDP-4-dehydrorhamnose 3-epimerase
                        copy AA seq
                        copy Nt seq
                        • CFP59_01551
                        • AUA09461.1
                        • eryCIII
                        2057794 - 2059047 (-) Desosaminyl transferase EryCIII precursor
                          copy AA seq
                          copy Nt seq
                          • CFP59_01552
                          • AUA09462.1
                          • lgrE_2
                          2059062 - 2059847 (-) Linear gramicidin dehydrogenase LgrE
                            copy AA seq
                            copy Nt seq
                            • CFP59_01553
                            • AUA09463.1
                            2059904 - 2066155 (-) Phenolphthiocerol synthesis polyketide synthase type I Pks15/1
                              copy AA seq
                              copy Nt seq
                              • CFP59_01554
                              • AUA09464.1
                              • eryA_20
                              2066194 - 2076384 (-) Erythronolide synthase, modules 3 and 4
                                copy AA seq
                                copy Nt seq
                                • CFP59_01555
                                • AUA09465.1
                                • eryA_21
                                2076409 - 2081358 (-) Erythronolide synthase, modules 5 and 6
                                  copy AA seq
                                  copy Nt seq
                                  • CFP59_01556
                                  • AUA09466.1
                                  • eryA_22
                                  2081420 - 2086456 (-) Erythronolide synthase, modules 1 and 2
                                    copy AA seq
                                    copy Nt seq
                                    • CFP59_01557
                                    • AUA09467.1
                                    • eryA_23
                                    2086456 - 2099811 (-) Erythronolide synthase, modules 1 and 2
                                      copy AA seq
                                      copy Nt seq
                                      • CFP59_01558
                                      • AUA09468.1
                                      • strE_1
                                      2099948 - 2100922 (-) dTDP-glucose 4,6-dehydratase
                                        copy AA seq
                                        copy Nt seq
                                        • CFP59_01559
                                        • AUA09469.1
                                        • rmlA2
                                        2100936 - 2101808 (-) Glucose-1-phosphate thymidylyltransferase 2
                                          copy AA seq
                                          copy Nt seq
                                          • CFP59_01560
                                          • AUA09470.1
                                          • nreC_4
                                          2101945 - 2104821 (-) Oxygen regulatory protein NreC
                                            copy AA seq
                                            copy Nt seq
                                            • CFP59_01561
                                            • AUA09471.1
                                            • fadB2_1
                                            2105382 - 2107100 (-) 3-hydroxybutyryl-CoA dehydrogenase
                                              copy AA seq
                                              copy Nt seq
                                              • CFP59_01562
                                              • AUA09472.1
                                              2107403 - 2108887 (+) hypothetical protein
                                                copy AA seq
                                                copy Nt seq
                                                • CFP59_01563
                                                • AUA09473.1
                                                2108906 - 2109226 (-) hypothetical protein
                                                  copy AA seq
                                                  copy Nt seq
                                                  Biosynthesis information

                                                  No biosynthesis information available for this record.

                                                  Annotation changelog

                                                  Entry version: 2

                                                  Date
                                                  Changes
                                                  Submitters
                                                  Reviewers
                                                  Changed chemical structures for compounds: efomycin L, efomycin K.
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  Added NPAtlas links to compounds: efomycin L, efomycin K.
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                  Entry version: 1

                                                  Date
                                                  Changes
                                                  Submitters
                                                  Reviewers
                                                  Entry added
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                  Similar known clusters from MIBiG 4.0
                                                  Shows clusters from the MIBiG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                                  Detailed help and explanations are available here.

                                                  Click on reference genes to show details of similarities to genes within the current region.
                                                  Double click on a reference drawing to reverse the display of the genes.

                                                  Click on an accession to open that entry in the MIBiG database.


                                                  Location:

                                                  Identifier
                                                  Identity
                                                  Coverage
                                                  Detailed domain annotation
                                                  Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                                  A domain glossary is available here, and an explanation of the visualisation is available here.
                                                  Selected features only
                                                  Show module domains