BGC0002417: variochelin A biosynthetic gene cluster from Variovorax paradoxus B4
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Location: 4,058,065 - 4,128,003 nt. (total: 69,939 nt).
This entry is originally from NCBI GenBank CP003911.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
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General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
NRPS/PKS domains
General information about the BGC
MIBiG accession BGC0002417
Short description variochelin A biosynthetic gene cluster from Variovorax paradoxus B4
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
  • PKS (Unknown)
Loci
CP003911.1
4072277 - 4110613
via
Compounds
  • variochelin A
  • variochelin B
Species Variovorax paradoxus B4 [taxonomy]
References
Chemical products information
variochelin A Evidence:
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Chemical database entries
NPAtlas
variochelin B Evidence:
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Chemical database entries
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • VAPA_1c38580
  • AGU50940.1
 4072277 - 4072897 (+) RNA polymerase sigma factor, sigma-70 family
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    • VAPA_1c38590
    • AGU50941.1
    • fecR1
    		 4072913 - 4073131 (+) putative anti-FecI sigma factor FecR
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      • VAPA_1c38600
      • AGU50942.1
      		 4073142 - 4073378 (-) hypothetical protein
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        • VAPA_1c38610
        • AGU50943.1
        		 4073375 - 4075066 (-) cyclic peptide transporter
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          • VAPA_1c38620
          • AGU50944.1
          		 4075200 - 4076045 (+) putative ferric iron reductase
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            • VAPA_1c38630
            • AGU50945.1
            		 4076146 - 4076991 (+) putative formyl transferase
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              • VAPA_1c38640
              • AGU50946.1
              		 4076988 - 4078022 (+) GNAT domain-containing protein
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                • VAPA_1c38650
                • AGU50947.1
                		 4078065 - 4079417 (+) putative monooxygenase
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                  • VAPA_1c38660
                  • AGU50948.1
                  		 4079580 - 4081748 (+) putative plug domain-containing TonB-dependent receptor
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                    • VAPA_1c38670
                    • AGU50949.1
                    		 4081826 - 4085899 (-) putative non-ribosomal peptide synthetase
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                      • VAPA_1c38680
                      • AGU50950.1
                      		 4085896 - 4093773 (-) putative non-ribosomal peptide synthetase
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                        • VAPA_1c38690
                        • AGU50951.1
                        		 4093773 - 4097114 (-) putative non-ribosomal peptide synthetase
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                          • VAPA_1c38700
                          • AGU50952.1
                          		 4097111 - 4101673 (-) putative polyketide synthase
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                            • VAPA_1c38710
                            • AGU50953.1
                            		 4101675 - 4106990 (-) putative non-ribosomal peptide synthetase
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                              • VAPA_1c38720
                              • AGU50954.1
                              • tauD
                              		 4107011 - 4108003 (-) putative alpha-ketoglutarate-dependent taurine dioxygenase TauD
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                                • VAPA_1c38730
                                • AGU50955.1
                                		 4108000 - 4108689 (-) putative 4'-phosphopantetheinyl transferase
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                                  • VAPA_1c38740
                                  • AGU50956.1
                                  		 4108667 - 4109404 (-) thioesterase domain-containing protein
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                                    • VAPA_1c38750
                                    • AGU50957.1
                                    		 4109410 - 4109667 (-) MbtH domain-containing protein
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                                      • VAPA_1c38760
                                      • AGU50958.1
                                      • fecR2
                                      		 4109768 - 4109971 (-) putative anti-FecI sigma factor FecR
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                                        • VAPA_1c38770
                                        • AGU50959.1
                                        		 4110068 - 4110613 (-) putative RNA polymerase sigma factor, sigma-70 family
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                                          Biosynthesis information

                                          No biosynthesis information available for this record.

                                          Annotation changelog

                                          Entry version: 2

                                          Date
                                          Changes
                                          Submitters
                                          Reviewers
                                          2022-10-07
                                          Added chemical structures for compounds: variochelin A, variochelin B.
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                          2022-10-07
                                          Added NPAtlas links to compounds: variochelin A, variochelin B.
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                          Entry version: 1

                                          Date
                                          Changes
                                          Submitters
                                          Reviewers
                                          2022-09-15
                                          Entry added
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
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