BGC0002654: lapcin biosynthetic gene cluster from uncultured bacterium
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 49,405 nt. (total: 49,405 nt).
This entry is originally from NCBI GenBank MZ165589.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
NRPS/PKS domains
General information about the BGC
MIBiG accession BGC0002654
Short description lapcin biosynthetic gene cluster from uncultured bacterium
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
Loci
MZ165589.1
1 - 49405
via
Compounds
  • lapcin
Species uncultured bacterium [taxonomy]
References
Chemical products information
lapcin Evidence:
Copy SMILES
C64H77N11O15S2
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • UHJ79941.1
1 - 837 (+) pentapeptide repeat protein
    copy AA seq
    copy Nt seq
    • UHJ79942.1
    770 - 3352 (-) non-ribosomal peptide synthetase
      copy AA seq
      copy Nt seq
      • UHJ79943.1
      3658 - 5535 (-) radical SAM protein
        copy AA seq
        copy Nt seq
        • UHJ79944.1
        5611 - 6789 (-) benzoyl-coA 2,3-epoxidase
          copy AA seq
          copy Nt seq
          • UHJ79945.1
          7066 - 7545 (-) DUF1579 domain-containing protein
            copy AA seq
            copy Nt seq
            • UHJ79946.1
            7769 - 8725 (+) alpha/beta hydrolase
              copy AA seq
              copy Nt seq
              • UHJ79947.1
              8722 - 9759 (+) methyltransferase domain-containing protein
                copy AA seq
                copy Nt seq
                • UHJ79948.1
                9770 - 15682 (+) non-ribosomal peptide synthetase
                  copy AA seq
                  copy Nt seq
                  • UHJ79949.1
                  15679 - 16869 (+) flavin-dependent dehydrogenase
                    copy AA seq
                    copy Nt seq
                    • UHJ79950.1
                    16866 - 17666 (-) thioesterase
                      copy AA seq
                      copy Nt seq
                      • UHJ79951.1
                      18087 - 34397 (+) non-ribosomal peptide synthetase
                        copy AA seq
                        copy Nt seq
                        • UHJ79952.1
                        34358 - 36454 (+) non-ribosomal peptide synthetase
                          copy AA seq
                          copy Nt seq
                          • UHJ79953.1
                          36488 - 45952 (+) non-ribosomal peptide synthetase
                            copy AA seq
                            copy Nt seq
                            • UHJ79954.1
                            45990 - 46193 (-) MbtH family NRPS accessory protein
                              copy AA seq
                              copy Nt seq
                              • UHJ79955.1
                              46224 - 47120 (-) branched-chain amino acid aminotransferase
                                copy AA seq
                                copy Nt seq
                                • UHJ79956.1
                                47213 - 49405 (-) aminodeoxychorismate synthase component I
                                  copy AA seq
                                  copy Nt seq
                                  Biosynthesis information

                                  Biosynthetic modules

                                  Name
                                  Unk01
                                  Type
                                  nrps-type1
                                  Genes
                                  UHJ79948.1
                                  Substrates
                                  4-amino-2-hydroxy-3-isopropoxybenzoic acid (evidence: Sequence-based prediction [1])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk02
                                  Type
                                  nrps-type1
                                  Genes
                                  UHJ79948.1
                                  Substrates
                                  para-aminobenzoic acid (evidence: Sequence-based prediction [1])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk03
                                  Type
                                  nrps-type1
                                  Genes
                                  UHJ79951.1
                                  Substrates
                                  para-aminobenzoic acid (evidence: Sequence-based prediction [1])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk04
                                  Type
                                  nrps-type1
                                  Genes
                                  UHJ79951.1
                                  Substrates
                                  cysteine (evidence: Sequence-based prediction [1])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk05
                                  Type
                                  nrps-type1
                                  Genes
                                  UHJ79951.1
                                  Substrates
                                  cysteine (evidence: Sequence-based prediction [1])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk06
                                  Type
                                  nrps-type1
                                  Genes
                                  UHJ79951.1
                                  Substrates
                                  asparagine (evidence: Sequence-based prediction [1])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk07
                                  Type
                                  nrps-type1
                                  Genes
                                  UHJ79951.1
                                  Substrates
                                  para-aminobenzoic acid (evidence: Sequence-based prediction [1])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk08
                                  Type
                                  nrps-type1
                                  Genes
                                  UHJ79953.1
                                  Substrates
                                  alanine (evidence: Sequence-based prediction [1])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk09
                                  Type
                                  nrps-type1
                                  Genes
                                  UHJ79953.1
                                  Substrates
                                  serine (evidence: Sequence-based prediction [1])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Name
                                  Unk10
                                  Type
                                  nrps-type1
                                  Genes
                                  UHJ79953.1
                                  Substrates
                                  alanine (evidence: Sequence-based prediction [1])
                                  Integrated Monomers
                                  Domains
                                  adenylation
                                  Annotation changelog

                                  Entry version: 2

                                  Date
                                  Changes
                                  Submitters
                                  Reviewers
                                  MIBiG v4 annotathon
                                  • (ID: 3OFRGD3XQY2W5RRQYRWHG5KI)
                                  • (ID: D5UIALNVPDWCMADVVDHBCS3X)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                  Entry version: 1

                                  Date
                                  Changes
                                  Submitters
                                  Reviewers
                                  Entry added
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  Added NRP substrate specificities
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                  Similar known clusters from MIBiG 4.0
                                  Shows clusters from the MIBiG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                  Detailed help and explanations are available here.

                                  Click on reference genes to show details of similarities to genes within the current region.
                                  Double click on a reference drawing to reverse the display of the genes.

                                  Click on an accession to open that entry in the MIBiG database.


                                  Location:

                                  Identifier
                                  Identity
                                  Coverage
                                  Detailed domain annotation
                                  Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                  A domain glossary is available here, and an explanation of the visualisation is available here.
                                  Selected features only
                                  Show module domains