BGC0000047: 10,11-dihydro-8-deoxy-12,13-deepoxy-12,13-dihydrochalcomycin biosynthetic gene cluster from Streptomyces sp. KCTC 0041BP
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 75,439 nt. (total: 75,439 nt).
This entry is originally from NCBI GenBank AY118081.2.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000047
Short description 10,11-dihydro-8-deoxy-12,13-deepoxy-12,13-dihydrochalcomycin biosynthetic gene cluster from Streptomyces sp. KCTC 0041BP
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • PKS (Unknown)
Loci
AY118081.2
via
Compounds
  • 10,11-dihydro-8-deoxy-12,13-deepoxy-12,13-dihydrochalcomycin
Species Streptomyces sp. KCTC 0041BP [taxonomy]
References
Chemical products information
10,11-dihydro-8-deoxy-12,13-deepoxy-12,13-dihydrochalcomycin Evidence:
Copy SMILES
C34H58O12
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ABB52538.1
  • ger1
580 - 2118 (-) putative transferase protein
    copy AA seq
    copy Nt seq
    • ABB52537.1
    • ger2
    2419 - 4473 (-) hypothetical protein
      copy AA seq
      copy Nt seq
      • ABB52536.1
      • ger3
      4661 - 5656 (-) hypothetical protein
        copy AA seq
        copy Nt seq
        • ABB52535.1
        • ger4
        5808 - 6812 (-) hypothetical protein
          copy AA seq
          copy Nt seq
          • ABB52534.1
          • gerO
          6859 - 7863 (-) putative oxidoreductase
            copy AA seq
            copy Nt seq
            • ABB52533.1
            • gerB
            7964 - 9181 (-) 3,4-dehydratase-like protein
              copy AA seq
              copy Nt seq
              • ABB52532.1
              • gerMI
              9314 - 10129 (-) sugar-O-methyltransferase
                copy AA seq
                copy Nt seq
                • ABB52531.1
                • gerN
                10291 - 11748 (-) NDP-4,6-dideoxyhexose-3,4-enoyl reductase
                  copy AA seq
                  copy Nt seq
                  • ABB52530.1
                  • gerR
                  11834 - 14305 (-) beta glucosidase
                    copy AA seq
                    copy Nt seq
                    • ABB52529.1
                    • gerPI
                    14467 - 15672 (-) cytochrome P-450
                      copy AA seq
                      copy Nt seq
                      • ABB52528.1
                      • gerPII
                      15738 - 16961 (-) cytochrome P-450
                        copy AA seq
                        copy Nt seq
                        • ABB52527.1
                        • gerG
                        16976 - 17800 (-) type II thioesterase
                          copy AA seq
                          copy Nt seq
                          • ABB52526.1
                          • gerE
                          17821 - 18783 (-) dTDP-glucose-4,6-dehydratase
                            copy AA seq
                            copy Nt seq
                            • ABB52525.1
                            • gerD
                            18835 - 19722 (-) alpha-D-glucose-1-phosphate thymidylyltransferase
                              copy AA seq
                              copy Nt seq
                              • ABB52524.1
                              • gerF
                              20062 - 20652 (-) NDP-hexose-3-epimerase
                                copy AA seq
                                copy Nt seq
                                • ABB52523.1
                                • gerMII
                                20718 - 21485 (-) 3-O-methyltransferase
                                  copy AA seq
                                  copy Nt seq
                                  • ABB52539.1
                                  • gerPIII
                                  21746 - 23008 (+) cytochrome P-450
                                    copy AA seq
                                    copy Nt seq
                                    • ABB52540.1
                                    • gerH
                                    23026 - 23247 (+) ferredoxin
                                      copy AA seq
                                      copy Nt seq
                                      • ABB52541.1
                                      • gerKI
                                      23244 - 24224 (+) hexose-4-ketoreductase
                                        copy AA seq
                                        copy Nt seq
                                        • ABB52542.1
                                        • gerMIII
                                        24256 - 25467 (+) O-methyltransferase
                                          copy AA seq
                                          copy Nt seq
                                          • ABB52543.1
                                          • gerTI
                                          25523 - 26779 (+) 6-deoxy-D-allosyltransferase
                                            copy AA seq
                                            copy Nt seq
                                            • ABB52522.1
                                            • gerA
                                            26850 - 27692 (-) 23S rRNA-methyltransferase
                                              copy AA seq
                                              copy Nt seq
                                              • AAM81584.2
                                              • gerSI
                                              27962 - 41125 (+) putative type I polyketide synthase
                                                copy AA seq
                                                copy Nt seq
                                                • AAM81585.1
                                                • gerSII
                                                41222 - 47152 (+) putative type I polyketide synthase
                                                  copy AA seq
                                                  copy Nt seq
                                                  • AAM81586.2
                                                  • gerSIII
                                                  47282 - 58486 (+) putative type I polyketide synthase
                                                    copy AA seq
                                                    copy Nt seq
                                                    • ABB52544.1
                                                    • gerSIV
                                                    58537 - 63393 (+) putative type I polyketide synthase
                                                      copy AA seq
                                                      copy Nt seq
                                                      • ABB52545.1
                                                      • gerSV
                                                      63500 - 67573 (+) putative type I polyketide synthase
                                                        copy AA seq
                                                        copy Nt seq
                                                        • ABB52546.1
                                                        • gerY
                                                        67655 - 68869 (+) NDP-hexose-3,4-isomerase
                                                          copy AA seq
                                                          copy Nt seq
                                                          • ABB52547.1
                                                          • gerTII
                                                          68913 - 70190 (+) chalcosyltransferase
                                                            copy AA seq
                                                            copy Nt seq
                                                            • ABB52548.1
                                                            • gerKII
                                                            70304 - 71050 (+) 3-oxoacyl-(acyl-carrier-protein)-reductase
                                                              copy AA seq
                                                              copy Nt seq
                                                              • ABB52549.1
                                                              • ger31
                                                              73062 - 74804 (+) putative transcriptional regulator
                                                                copy AA seq
                                                                copy Nt seq
                                                                Biosynthesis information
                                                                Annotation changelog

                                                                Entry version: 4

                                                                Date
                                                                Changes
                                                                Submitters
                                                                Reviewers
                                                                Update chemical activity to schema version 2.11
                                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                Entry version: 3

                                                                Date
                                                                Changes
                                                                Submitters
                                                                Reviewers
                                                                Updated bioactivity data
                                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                Entry version: 2

                                                                Date
                                                                Changes
                                                                Submitters
                                                                Reviewers
                                                                Migrated from v1.4
                                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                Updated compound(s) information (MIBiG Annotathon)
                                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                Entry version: 1

                                                                Date
                                                                Changes
                                                                Submitters
                                                                Reviewers
                                                                Submitted
                                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                Detailed domain annotation
                                                                Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                                                A domain glossary is available here, and an explanation of the visualisation is available here.
                                                                Selected features only
                                                                Show module domains
                                                                Similar known gene clusters from MIBiG 4.0
                                                                Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                                                Click on reference genes to show details of similarities to genes within the current region.
                                                                Click on an accession to open that entry in the MiBIG database.