BGC0000106: naphthomycin A biosynthetic gene cluster from Streptomyces sp. CS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 106,181 nt. (total: 106,181 nt).
This entry is originally from NCBI GenBank GQ452266.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
NRPS/PKS domains
General information about the BGC
MIBiG accession BGC0000106
Short description naphthomycin A biosynthetic gene cluster from Streptomyces sp. CS
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • PKS (Unknown)
Loci
GQ452266.1
via Knock-out studies
Compounds
  • naphthomycin A
Species Streptomyces sp. CS [taxonomy]
References
Chemical products information
naphthomycin A Evidence:
Copy SMILES
C40H46Cl1N1O9
Chemical database entries
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ADM46349.1
<5 - 1730 (+) ATP/GTP-binding protein
    copy AA seq
    copy Nt seq
    • ADM46350.1
    1897 - 4032 (+) ATP/GTP-binding protein
      copy AA seq
      copy Nt seq
      • ADM46351.1
      4107 - 4250 (-) hypothetical protein
        copy AA seq
        copy Nt seq
        • ADM46352.1
        4714 - 5007 (-) protoporphyrinogen oxidase
          copy AA seq
          copy Nt seq
          • ADM46353.1
          6855 - 8072 (+) transcriptional regulator
            copy AA seq
            copy Nt seq
            • ADM46354.1
            8300 - 8935 (+) acyl carrier protein phosphodiesterase
              copy AA seq
              copy Nt seq
              • ADM46355.1
              9033 - 10226 (+) cytochrome P450-like protein
                copy AA seq
                copy Nt seq
                • ADM46356.1
                • natA
                10604 - 27700 (+) polyketide synthase
                  copy AA seq
                  copy Nt seq
                  • ADM46357.1
                  • natB
                  27735 - 43754 (+) polyketide synthase
                    copy AA seq
                    copy Nt seq
                    • ADM46358.1
                    • natC
                    43801 - 59766 (+) polyketide synthase
                      copy AA seq
                      copy Nt seq
                      • ADM46359.1
                      • natD
                      59868 - 70733 (+) polyketide synthase
                        copy AA seq
                        copy Nt seq
                        • ADM46360.1
                        • natE
                        70764 - 81365 (+) polyketide synthase
                          copy AA seq
                          copy Nt seq
                          • ADM46361.1
                          • natF
                          81409 - 82278 (+) amide synthase
                            copy AA seq
                            copy Nt seq
                            • ADM46362.1
                            • nat1
                            82335 - 83678 (+) halogenase
                              copy AA seq
                              copy Nt seq
                              • ADM46363.1
                              • natG
                              83802 - 84863 (+) 3-dehydroquinate synthase
                                copy AA seq
                                copy Nt seq
                                • ADM46364.1
                                • natH
                                84896 - 86332 (+) DAHP synthase
                                  copy AA seq
                                  copy Nt seq
                                  • ADM46365.1
                                  • natI
                                  86329 - 87174 (+) shikimate/quinate dehydrogenase
                                    copy AA seq
                                    copy Nt seq
                                    • ADM46366.1
                                    • natK
                                    87338 - 88498 (+) 3-amino-5-hydroxybenzoic acid synthase
                                      copy AA seq
                                      copy Nt seq
                                      • ADM46367.1
                                      • natL
                                      88495 - 89589 (+) oxidoreductase
                                        copy AA seq
                                        copy Nt seq
                                        • ADM46368.1
                                        • natM
                                        89597 - 90292 (+) phosphatase
                                          copy AA seq
                                          copy Nt seq
                                          • ADM46369.1
                                          • natN
                                          90295 - 91215 (+) glucose kinase
                                            copy AA seq
                                            copy Nt seq
                                            • ADM46370.1
                                            • nat2
                                            91304 - 93061 (-) FAD-dependent oxidoreductase
                                              copy AA seq
                                              copy Nt seq
                                              • ADM46371.1
                                              • natR
                                              93194 - 93967 (+) thioesterase
                                                copy AA seq
                                                copy Nt seq
                                                • ADM46372.1
                                                • nat4
                                                94001 - 95386 (+) membrane ion antiporter
                                                  copy AA seq
                                                  copy Nt seq
                                                  • ADM46373.1
                                                  • natJ
                                                  95383 - 95823 (+) aminodehydroquinate dehydratase
                                                    copy AA seq
                                                    copy Nt seq
                                                    • ADM46374.1
                                                    • nat5
                                                    95894 - 96586 (+) putative alpha/beta fold family protein
                                                      copy AA seq
                                                      copy Nt seq
                                                      • ADM46375.1
                                                      • nat6
                                                      96664 - 97227 (+) activator of Hsp90 ATPase
                                                        copy AA seq
                                                        copy Nt seq
                                                        • ADM46376.1
                                                        • nat7
                                                        97324 - 98754 (-) metallopeptidase
                                                          copy AA seq
                                                          copy Nt seq
                                                          • ADM46377.1
                                                          • nat8
                                                          98931 - 99689 (+) gntr family transcriptional regulator
                                                            copy AA seq
                                                            copy Nt seq
                                                            • ADM46378.1
                                                            • nat9
                                                            99954 - 101543 (+) amino-acid permease transmembrane protein
                                                              copy AA seq
                                                              copy Nt seq
                                                              • ADM46379.1
                                                              • nat10
                                                              101969 - 102385 (+) hydrolase
                                                                copy AA seq
                                                                copy Nt seq
                                                                • ADM46380.1
                                                                • nat11
                                                                103250 - 105862 (+) magnesium or manganese-dependent protein phosphatase
                                                                  copy AA seq
                                                                  copy Nt seq
                                                                  Biosynthesis information

                                                                  No biosynthesis information available for this record.

                                                                  Annotation changelog

                                                                  Entry version: 4

                                                                  Date
                                                                  Changes
                                                                  Submitters
                                                                  Reviewers
                                                                  Update chemical activity to schema version 2.11
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                  Entry version: 3

                                                                  Date
                                                                  Changes
                                                                  Submitters
                                                                  Reviewers
                                                                  Updated bioactivity data
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                  Entry version: 2

                                                                  Date
                                                                  Changes
                                                                  Submitters
                                                                  Reviewers
                                                                  Migrated from v1.4
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  Updated compound(s) information (NPAtlas curation)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                  Entry version: 1

                                                                  Date
                                                                  Changes
                                                                  Submitters
                                                                  Reviewers
                                                                  Submitted
                                                                  • (ID: HRPPCVKCIQDPTKAL4P4W6CV7)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  Similar known clusters from MIBiG 4.0
                                                                  Shows clusters from the MIBiG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                                                  Detailed help and explanations are available here.

                                                                  Click on reference genes to show details of similarities to genes within the current region.
                                                                  Double click on a reference drawing to reverse the display of the genes.

                                                                  Click on an accession to open that entry in the MIBiG database.


                                                                  Location:

                                                                  Identifier
                                                                  Identity
                                                                  Coverage
                                                                  Detailed domain annotation
                                                                  Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                                                  A domain glossary is available here, and an explanation of the visualisation is available here.
                                                                  Selected features only
                                                                  Show module domains