BGC0000210: chromomycin A3 biosynthetic gene cluster from Streptomyces griseus subsp. griseus
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 42,074 nt. (total: 42,074 nt).
This entry is originally from NCBI GenBank AJ578458.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000210
Short description chromomycin A3 biosynthetic gene cluster from Streptomyces griseus subsp. griseus
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: complete
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • PKS (Type II)
  • saccharide (oligosaccharide)
Loci
AJ578458.1
via Knock-out studies, Enzymatic assays
Compounds
  • chromomycin A3
Species Streptomyces griseus subsp. griseus [taxonomy]
References
Chemical products information
chromomycin A3 Evidence:
Copy SMILES
C57H82O26
Chemical database entries
NPAtlas
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • CAE17518.1
  • cmmY
8 - 784 (-) cyclase
    copy AA seq
    copy Nt seq
    • CAE17519.1
    • cmmTI
    825 - 1583 (-) ketoreductase
      copy AA seq
      copy Nt seq
      • CAE17520.1
      • cmmS
      1585 - 1836 (-) acyl carrier protein
        copy AA seq
        copy Nt seq
        • CAE17521.1
        • cmmV
        2050 - 3432 (+) NDP-2,3-dehydratase
          copy AA seq
          copy Nt seq
          • CAE17522.1
          • cmmW
          3417 - 4427 (+) NDP-3-ketoreductase
            copy AA seq
            copy Nt seq
            • CAE17523.1
            • cmmUII
            4438 - 5193 (+) NDP-4-ketoreductase
              copy AA seq
              copy Nt seq
              • CAE17524.1
              • cmmOI
              6855 - 8102 (+) oxygenase
                copy AA seq
                copy Nt seq
                • CAE17525.1
                • cmmX
                8182 - 8610 (+) cyclase
                  copy AA seq
                  copy Nt seq
                  • CAE17526.1
                  • cmmK
                  8691 - 9959 (-) ketosynthase
                    copy AA seq
                    copy Nt seq
                    • CAE17527.1
                    • cmmP
                    9956 - 11224 (-) ketosynthase
                      copy AA seq
                      copy Nt seq
                      • CAE17528.1
                      • cmmE
                      11221 - 12201 (-) NDP-4,6-dehydratase
                        copy AA seq
                        copy Nt seq
                        • CAE17529.1
                        • cmmD
                        12198 - 13265 (-) NDP-glucose synthase
                          copy AA seq
                          copy Nt seq
                          • CAE17530.1
                          • cmmMIII
                          13459 - 14211 (+) sugar O-methyltransferase
                          • Tailoring
                          • Knock-out Other in vivo study
                          copy AA seq
                          copy Nt seq
                          • CAE17531.1
                          • cmmRI
                          14323 - 15225 (-) transcriptional regulator
                          • Regulation
                          • Knock-out Other in vivo study
                          copy AA seq
                          copy Nt seq
                          • CAE17532.1
                          • cmmMII
                          15688 - 16716 (+) C-methyltransferase
                            copy AA seq
                            copy Nt seq
                            • CAE17533.1
                            • cmmUI
                            16725 - 17474 (+) NDP-4-ketoreductase
                              copy AA seq
                              copy Nt seq
                              • CAE17534.1
                              • cmmMI
                              17530 - 18603 (+) O-methyltransferase
                                copy AA seq
                                copy Nt seq
                                • CAE17535.1
                                • cmmGI
                                18623 - 19804 (+) glycosyltransferase
                                • Tailoring
                                • Knock-out
                                copy AA seq
                                copy Nt seq
                                • CAE17536.1
                                • cmmOIV
                                19818 - 21338 (+) oxygenase
                                • Tailoring
                                • Knock-out Activity assay
                                copy AA seq
                                copy Nt seq
                                • CAE17537.1
                                • cmmWI
                                21346 - 22329 (+) side-chain ketoreductase
                                • Tailoring
                                • Knock-out
                                copy AA seq
                                copy Nt seq
                                • CAE17538.1
                                • cmmLI
                                22349 - 23590 (+) acyl CoA ligase
                                  copy AA seq
                                  copy Nt seq
                                  • CAE17539.1
                                  • cmrB
                                  23643 - 24395 (-) membrane protein
                                    copy AA seq
                                    copy Nt seq
                                    • CAE17540.1
                                    • cmrA
                                    24410 - 25387 (-) ATP-binding protein
                                      copy AA seq
                                      copy Nt seq
                                      • CAE17541.1
                                      • cmmRII
                                      25390 - 25986 (-) transcriptional regulator
                                      • Regulation
                                      • Knock-out Other in vivo study
                                      copy AA seq
                                      copy Nt seq
                                      • CAE17542.1
                                      • cmrX
                                      26082 - 28562 (+) UV-repair protein
                                      • Resistance/immunity
                                      • Knock-out Other in vivo study
                                      copy AA seq
                                      copy Nt seq
                                      • CAE17543.1
                                      • cmmC
                                      28766 - 29992 (+) NDP-C-methyltransferase
                                        copy AA seq
                                        copy Nt seq
                                        • CAE17544.1
                                        • cmmUIII
                                        29965 - 31035 (-) NDP-4-ketoreductase
                                          copy AA seq
                                          copy Nt seq
                                          • CAE17545.1
                                          • cmmGIII
                                          31041 - 32234 (-) glycosyltransferase
                                          • Tailoring
                                          • Knock-out
                                          copy AA seq
                                          copy Nt seq
                                          • CAE17546.1
                                          • cmmA
                                          32240 - 33508 (-) acetyltransferase
                                          • Tailoring
                                          • Knock-out Activity assay
                                          copy AA seq
                                          copy Nt seq
                                          • CAE17547.1
                                          • cmmGIV
                                          33505 - 34770 (-) glycosyltransferase
                                          • Tailoring
                                          • Knock-out
                                          copy AA seq
                                          copy Nt seq
                                          • CAE17548.1
                                          • cmmGII
                                          34919 - 36109 (+) glycosyltransferase
                                          • Tailoring
                                          • Knock-out
                                          copy AA seq
                                          copy Nt seq
                                          • CAE17549.1
                                          • cmmF
                                          36097 - 36726 (+) NDP-5-epimerase
                                            copy AA seq
                                            copy Nt seq
                                            • CAE17550.1
                                            • cmmOII
                                            36762 - 38435 (+) oxygenase
                                              copy AA seq
                                              copy Nt seq
                                              • CAE17551.1
                                              • cmmTII
                                              38437 - 39198 (+) ketoreductase
                                                copy AA seq
                                                copy Nt seq
                                                • CAE17552.1
                                                • cmmQ
                                                39332 - 40288 (+) aromatase
                                                  copy AA seq
                                                  copy Nt seq
                                                  • CAE17553.1
                                                  • cmmLII
                                                  40362 - 41948 (+) acyl CoA ligase
                                                    copy AA seq
                                                    copy Nt seq
                                                    Biosynthesis information
                                                    Annotation changelog

                                                    Entry version: 4

                                                    Date
                                                    Changes
                                                    Submitters
                                                    Reviewers
                                                    Update chemical activity to schema version 2.11
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                    Entry version: 3

                                                    Date
                                                    Changes
                                                    Submitters
                                                    Reviewers
                                                    Removed duplicate gene annotation
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                    Updated bioactivity data
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                    Entry version: 2

                                                    Date
                                                    Changes
                                                    Submitters
                                                    Reviewers
                                                    Migrated from v1.4
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                    Updated compound(s) information (NPAtlas curation)
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                    Entry version: 1

                                                    Date
                                                    Changes
                                                    Submitters
                                                    Reviewers
                                                    Submitted
                                                    • (ID: QGSJT55NWIBPAZQIATLZ7G55)
                                                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                    Detailed domain annotation
                                                    Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                                    A domain glossary is available here, and an explanation of the visualisation is available here.
                                                    Selected features only
                                                    Show module domains
                                                    Similar known gene clusters from MIBiG 4.0
                                                    Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                                    Click on reference genes to show details of similarities to genes within the current region.
                                                    Click on an accession to open that entry in the MiBIG database.