BGC0000217: daunorubicin biosynthetic gene cluster from Streptomyces sp.
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 8,089 nt. (total: 8,089 nt).
This entry is originally from NCBI GenBank L34880.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000217
Short description daunorubicin biosynthetic gene cluster from Streptomyces sp.
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • PKS (Unknown)
Loci
L34880.1
via
Compounds
  • daunorubicin
Species Streptomyces sp. [taxonomy]
References
Chemical products information
daunorubicin Evidence:
Copy SMILES
C27H29N1O10
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAA87614.1
  • dauE
3 - 236 (+) aklaviketone reductase
    copy AA seq
    copy Nt seq
    • AAA87615.1
    • dauA
    373 - 1320 (-) cyclase/dehydrase
      copy AA seq
      copy Nt seq
      • AAA87616.1
      • dauB
      1350 - 2138 (-) polyketide reductase
        copy AA seq
        copy Nt seq
        • AAA87617.1
        2317 - 2712 (+) oxygenase
          copy AA seq
          copy Nt seq
          • AAA87618.1
          2709 - 3965 (+) polyketide synthase
            copy AA seq
            copy Nt seq
            • AAA87619.1
            4052 - 5248 (+) polyketide synthase
              copy AA seq
              copy Nt seq
              • AAA87620.1
              5245 - 6303 (+)
                copy AA seq
                copy Nt seq
                • AAA87621.1
                6314 - 7330 (+) acyltransferase
                  copy AA seq
                  copy Nt seq
                  • AAA87622.1
                  • dauC
                  7505 - 8089 (-) aklanonic acid methyltransferase
                    copy AA seq
                    copy Nt seq
                    Biosynthesis information
                    Annotation changelog

                    Entry version: 4

                    Date
                    Changes
                    Submitters
                    Reviewers
                    Update chemical activity to schema version 2.11
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                    Entry version: 3

                    Date
                    Changes
                    Submitters
                    Reviewers
                    Updated bioactivity data
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                    Entry version: 2

                    Date
                    Changes
                    Submitters
                    Reviewers
                    Migrated from v1.4
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                    Entry version: 1

                    Date
                    Changes
                    Submitters
                    Reviewers
                    Submitted
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    Detailed domain annotation
                    Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                    A domain glossary is available here, and an explanation of the visualisation is available here.
                    Selected features only
                    Show module domains
                    Similar known gene clusters from MIBiG 4.0
                    Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                    Click on reference genes to show details of similarities to genes within the current region.
                    Click on an accession to open that entry in the MiBIG database.