BGC0000265: rhodomycin biosynthetic gene cluster from Streptomyces purpurascens
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 12,970 nt. (total: 12,970 nt).
This entry is originally from NCBI GenBank U10405.2.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000265
Short description rhodomycin biosynthetic gene cluster from Streptomyces purpurascens
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Polyketide
Loci NCBI GenBank: U10405.2
Compounds
  • rhodomycin
Species Streptomyces purpurascens [taxonomy]
References
Chemical products information
rhodomycin
Copy SMILES
C36H48N2O12
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAA83420.1
  • rdmA
1 - 432 (+) RdmA
copy AA seq
copy Nt seq
  • AAA83421.1
  • rdmB
474 - 1598 (+) RdmB
copy AA seq
copy Nt seq
  • AAA83422.1
  • rdmC
1603 - 2499 (+) RdmC
copy AA seq
copy Nt seq
  • AAA83423.1
  • rdmD
2532 - 3245 (+) RdmD
copy AA seq
copy Nt seq
  • AAA83424.1
  • rdmE
3317 - 4924 (+) RdmE
copy AA seq
copy Nt seq
  • AAA83425.2
  • rdmF
5030 - 6070 (-) RdmF
copy AA seq
copy Nt seq
  • AAL24449.1
  • rdmG
6233 - 7648 (+) RdmG
copy AA seq
copy Nt seq
  • AAL24450.1
  • rdmH
7645 - 8931 (+) RdmH
copy AA seq
copy Nt seq
  • AAL24451.1
  • rdmI
8943 - 10244 (+) RdmI
copy AA seq
copy Nt seq
  • AAL24452.1
  • rdmJ
10252 - 11046 (+) RdmJ
copy AA seq
copy Nt seq
  • AAL24453.1
  • rdmK
11055 - 12413 (+) RdmK
copy AA seq
copy Nt seq
  • AAL24454.1
  • rdmL
12889 - >12969 (-) RdmL
copy AA seq
copy Nt seq
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
Show module domains
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.