BGC0000416: rhabdopeptide 1 biosynthetic gene cluster from Xenorhabdus nematophila ATCC 19061
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Location: 2,154,724 - 2,170,060 nt. (total: 15,337 nt).
This entry is originally from NCBI GenBank FN667742.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
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NRP
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NRPS/PKS domains
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General information about the BGC
MIBiG accession BGC0000416
Short description rhabdopeptide 1 biosynthetic gene cluster from Xenorhabdus nematophila ATCC 19061
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: complete
Whether the loci encodes everything needed for the pathway producing the compound(s)
Remarks "Overlaps, and possibly shares genes with nematophin (BGC0001692)."
Biosynthetic class(es)
  • NRP
Loci NCBI GenBank: FN667742.1
Compounds
  • rhabdopeptide 1
  • rhabdopeptide 2
  • rhabdopeptide 3
  • rhabdopeptide 4
Species Xenorhabdus nematophila ATCC 19061 [taxonomy]
References
Chemical products information
rhabdopeptide 1
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C32H55N5O4
rhabdopeptide 2
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C33H57N5O4
rhabdopeptide 3
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C38H66N6O5
rhabdopeptide 4
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C39H68N6O5
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • XNC1_2228
  • CBJ90287.1
 2154724 - 2159406 (+) peptide synthetase
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  • XNC1_2229
  • CBJ90288.1
 2159403 - 2164067 (+) Peptide synthetase
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  • XNC1_2230
  • CBJ90289.1
 2164064 - 2170060 (+) peptide synthetase
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NRP-specific information
Subclass N/A
Cyclic? no
NRP-synthases
Gene Modules
XNC1_2228
Module 1
Specificity: leucine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: LCL
Modification domains: Methylation
XNC1_2229
Module 2
Specificity: valine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: LCL
Modification domains: Methylation
Non-canonical activity:
  • Other
Evidence for non-canonical activity:
  • Structure-based inference
XNC1_2230
Module 3
Specificity: valine
Evidence for specificity:
  • Structure-based inference
Condensation domain type: LCL
Modification domains: Methylation
Module 4
Condensation domain type: LCL
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: SCFYH7235HZBUM2XBV52IUHT, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Corrected NRP module activity
  • Changed amino acid substrates to lower case
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
  • Add note about possible overlap with BGC0001692
Detailed domain annotation
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