BGC0000427: shinorine biosynthetic gene cluster from Trichormus variabilis ATCC 29413
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Location: 4,798,900 - 4,805,360 nt. (total: 6,461 nt).
This entry is originally from NCBI GenBank CP000117.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
Genes
NRP
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000427
Short description shinorine biosynthetic gene cluster from Trichormus variabilis ATCC 29413
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: complete
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP
Loci NCBI GenBank: CP000117.1
Compounds
  • shinorine
  • 4-deoxygadusol
  • mycosporine glycine
Species Trichormus variabilis ATCC 29413 [taxonomy]
References
Chemical products information
shinorine
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C13H20N2O8
4-deoxygadusol
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C8H12O5
mycosporine glycine
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C10H15N1O6
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • Ava_3855
  • ABA23460.1
 4798900 - 4801566 (-) Amino acid adenylation
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  • Ava_3856
  • ABA23461.1
 4801723 - 4803099 (-) ATP-grasp enzyme-like protein
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  • Ava_3857
  • ABA23462.1
 4803114 - 4803953 (-) O-methyltransferase, family 3
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  • Ava_3858
  • ABA23463.1
 4804128 - 4805360 (-) 3-dehydroquinate synthase
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NRP-specific information
Subclass N/A
Cyclic? no
Thioesterase genes
  • Ava_3855 (Type I)
NRP-synthases
Gene Modules
Ava_3855
Module 0
Specificity: serine
Evidence for specificity:
  • Activity assay
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AK6U5FV25F7Z3GQ43DVTSAVK, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Corrected NRP module activity
  • Updated bioactivity data
  • Updated NRP substrate specificities
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Detailed domain annotation
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