BGC0000436: syringolin A biosynthetic gene cluster from Rhizobium sp. AP16
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Location: 7,793 - 28,527 nt. (total: 20,735 nt).
This entry is originally from NCBI GenBank AJVM01000074.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
Genes
NRP
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000436
Short description syringolin A biosynthetic gene cluster from Rhizobium sp. AP16
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP
Loci NCBI GenBank: AJVM01000074.1
Compounds
  • syringolin A
Species Rhizobium sp. AP16 [taxonomy]
References
Chemical products information
syringolin A
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C24H39N5O6
Chemical database entries
NPAtlas
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • PMI03_05096
  • EJK79838.1
 7793 - 8179 (-) uncharacterized protein, 4-oxalocrotonate tautomerase
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  • PMI03_05097
  • EJK79839.1
 8249 - 9004 (-) putative thioesterase involved in non-ribosomal peptide biosynthesis
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  • PMI03_05098
  • EJK79840.1
 8979 - 9086 (-) hypothetical protein
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  • PMI03_05099
  • EJK79841.1
 9083 - 10093 (-) fatty acid desaturase
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  • PMI03_05100
  • EJK79842.1
 10317 - 14654 (+) amino acid adenylation enzyme/thioester reductase family protein
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  • PMI03_05101
  • EJK79843.1
 14768 - 27253 (+) amino acid adenylation enzyme/thioester reductase family protein
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  • PMI03_05102
  • EJK79844.1
 27253 - 28527 (+) arabinose efflux permease family protein
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NRP-specific information
Subclass N/A
Cyclic? no
NRP-synthases
Gene Modules
PMI03_05100
Module ?
Specificity: isoleucine / valine
Evidence for specificity:
  • Structure-based inference
  • Homology
  • Heterologous expression
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
  • Updated compound(s) information (NPAtlas curation)
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Updated bioactivity data
  • Added NRP substrate specificities
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Detailed domain annotation
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