Genomic loci for this biosynthetic pathway

Cluster Type From To
The following clusters are from record BGC0000482.1:
Cluster 1RiPP1246

BGC0000482, trunkamide biosynthetic gene cluster from uncultured Prochloron. Locus 1. Full MIBiG entry.

Chemical compounds

Compound: trunkamide
PubChem ID: 9811230
SMILES string: Copy to clipboard
Molecular formula: C43H63N7O8S
Average molecular mass: 838.078 Da
Molecular activity: Cytotoxic

Class-specific details

Biosynthetic class(es):
RiPP subclass:
Cyanobactin (cyclic)
Peptides in this cluster:
RiPP core peptide sequence(s): TSIAPFC
Leader peptide length: 40
Follower peptide length: -1
Cleavage recognition site sequence(s): GVDAS, SYD, SYDD
Peptidase(s) involved in precursor cleavage:

Gene cluster description

trunkamide (BGC0000482). Gene Cluster 1. Biosynthetic class = RiPP. GenBank EU290744. Click on genes for more information.


biosynthetic genes
transport-related genes
regulatory genes
other genes

General MIBiG information on this cluster

Complete gene cluster sequence?incomplete
Evidence for cluster-compound connection:Sequence-based prediction
Contact for this cluster:Mohamed Donia (Princeton University)

Literature references

1. Donia MS et al. (2008) A global assembly line for cyanobactins. Nat Chem Biol 4(6):341-3. doi: 10.1038/nchembio.84. Epub 2008 Apr 20.