BGC0000484: glycocin F biosynthetic gene cluster from Lactobacillus plantarum
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Location: 1 - 6,789 nt. (total: 6,789 nt).
This entry is originally from NCBI GenBank GU552553.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
Genes
RiPP
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000484
Short description glycocin F biosynthetic gene cluster from Lactobacillus plantarum
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • RiPP (Head-to-tailcyclized peptide)
Loci NCBI GenBank: GU552553.1
Compounds
  • glycocin F
Species Lactobacillus plantarum [taxonomy]
References
Chemical products information
glycocin F
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ADV57359.1
  • gccI
 185 - 481 (+) hypothetical protein
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  • ADV57360.1
  • gccH
 903 - 1259 (-) hypothetical protein
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  • ADV57361.1
  • gccA
 1310 - 2578 (+) UDP-GlcNAc glycosyltransferase family 2
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  • ADV57362.1
  • gccB
 2565 - 4673 (+) bacteriocin ABC transporter of glycocin F
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  • ADV57363.1
  • gccC
 4670 - 5089 (+) hypothetical protein
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  • ADV57364.1
  • gccD
 5090 - 5623 (+) hypothetical protein
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  • ADV57365.1
  • gccE
 5593 - 6369 (+) putative LytTR response regulator
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  • ADV57366.1
  • gccF
 6447 - 6641 (+) prebacteriocin glycocin F
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RiPP-specific information
Subclass Head-to-tailcyclized peptide
Cyclic? no
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Similar known gene clusters
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