LOCUS       BGC0000491              4100 bp    DNA     linear   BCT 28-MAY-2009
DEFINITION  Lactobacillus gasseri gaaB, gaaC, gaaA, gaaD, gaaI, gaaT, gaaE
            genes, complete cds.
ACCESSION   BGC0000491
VERSION     BGC0000491
KEYWORDS    .
SOURCE      Lactobacillus gasseri
  ORGANISM  Lactobacillus gasseri
            Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
            Lactobacillus.
COMMENT     On Jul 28, 2008 this sequence version replaced AB007043.1.
            ##antiSMASH-Data-START##
            Version      :: 7.1.0
            Run date     :: 2024-10-17 13:44:04
            NOTE: This is a single region extracted from a larger record!
            Orig. start  :: 0
            Orig. end    :: 4100
            ##antiSMASH-Data-END##
FEATURES             Location/Qualifiers
     source          1..4100
                     /db_xref="taxon:1596"
                     /isolate="human infant feces"
                     /mol_type="genomic DNA"
                     /organism="Lactobacillus gasseri"
                     /strain="LA39"
     protocluster    1..4100
                     /aStool="rule-based-clusters"
                     /category="RiPP"
                     /contig_edge="True"
                     /core_location="[1221:1497]"
                     /cutoff="20000"
                     /detection_rule="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or
                     TIGR03604))"
                     /neighbourhood="5000"
                     /product="RiPP-like"
                     /protocluster_number="1"
                     /tool="antismash"
     proto_core      1222..1497
                     /aStool="rule-based-clusters"
                     /tool="antismash"
                     /cutoff="20000"
                     /detection_rule="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or
                     TIGR03604))"
                     /neighbourhood="5000"
                     /product="RiPP-like"
                     /protocluster_number="1"
     cand_cluster    1..4100
                     /candidate_cluster_number="1"
                     /contig_edge="True"
                     /detection_rules="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or
                     TIGR03604))"
                     /kind="single"
                     /product="RiPP-like"
                     /protoclusters="1"
                     /tool="antismash"
     subregion       1..4100
                     /aStool="externally annotated by: MIBiG"
                     /contig_edge="True"
                     /label="BGC0000491"
                     /subregion_number="1"
                     /tool="antismash"
     region          1..4100
                     /candidate_cluster_numbers="1"
                     /contig_edge="True"
                     /product="RiPP-like"
                     /region_number="1"
                     /rules="(strepbact or Antimicrobial14 or Bacteriocin_IId or
                     BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or
                     Lactococcin or Antimicrobial17 or Lactococcin_972 or
                     Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or
                     TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or
                     TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))"
                     /subregion_numbers="1"
                     /tool="antismash"
     gene            371..895
                     /gene="gaaB"
     CDS             371..895
                     /codon_start=1
                     /function="unknown"
                     /gene="gaaB"
                     /protein_id="BAG66052.1"
                     /transl_table=11
                     /translation="MSKNKNYFKWILGISSAVLIFYLRVLVSLKVDDNQLKNIQENQTL
                     LSVLFTIGLLAIVFFSILGTYFVSLYMLKNVFDKTTIHTKVKLIIYKVYFTCYSIYNLI
                     YFIYILISNKLMQPMEQNYFSILLYVAIAIGLYSSIRKLEKKDTDKALLIYTMVIFVVN
                     SILPIFSLLGR"
     gene            933..1115
                     /gene="gaaC"
     CDS             933..1115
                     /codon_start=1
                     /function="unknown"
                     /gene="gaaC"
                     /protein_id="BAG66053.1"
                     /transl_table=11
                     /translation="MDKKTKILFEVLYIICIIGPQFILFVTAKNNMYQLVGSFVGIVWF
                     SYIFWYIFFKQHKKM"
     gene            1222..1497
                     /gene="gaaA"
     CDS             1222..1497
                     /codon_start=1
                     /gene="gaaA"
                     /gene_functions="biosynthetic (rule-based-clusters)
                     RiPP-like: BacteriocIIc_cy"
                     /gene_kind="biosynthetic"
                     /note="structural gene for gassericin A"
                     /product="gassericin A"
                     /protein_id="BAA22261.1"
                     /sec_met_domain="BacteriocIIc_cy (E-value: 1.3e-53,
                     bitscore: 168.3, seeds: 3, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MVTKYGRNLGLNKVELFAIWAVLVVALLLTTANIYWIADQFGIHL
                     ATGTARKLLDAMASGASLGTAFAAILGVTLPAWALAAAGALGATAA"
     gene            1581..2069
                     /gene="gaaD"
     CDS             1581..2069
                     /codon_start=1
                     /function="unknown"
                     /gene="gaaD"
                     /protein_id="BAG66054.1"
                     /transl_table=11
                     /translation="MIRINNVRILIPLVLFIGILVGAGYEYYSSGNFQVEMMKEVNINQ
                     LMALSSIILKNTAAFLLLGLTLIVGKWFIILFFLINGFNIGMFSVHLSIIEFIVLFLPH
                     GIFEYVVFYSESKVFIIDLDGSPSKAWLFKRLGFIYLGLVLAALVEVFITPLIVQYVI"
     gene            2091..2252
                     /gene="gaaI"
     CDS             2091..2252
                     /codon_start=1
                     /gene="gaaI"
                     /product="immunity peptide"
                     /protein_id="BAG66055.1"
                     /transl_table=11
                     /translation="MQKLLRIIALISLIAAIISFFIFKINYITYILIGIFIGSGFIYQI
                     RAQGRNRK"
     gene            2275..2955
                     /gene="gaaT"
     CDS             2275..2955
                     /codon_start=1
                     /gene="gaaT"
                     /gene_functions="transport (smcogs) SMCOG1000:ABC
                     transporter ATP-binding protein (Score: 130.2; E-value:
                     1.7e-39)"
                     /gene_kind="transport"
                     /product="putative ATP binding protein"
                     /protein_id="BAG66056.1"
                     /transl_table=11
                     /translation="MTRNMFVDIKNVSKNLTDFSLENLNISFEKGEIIGLVGENGAGKT
                     TLLNLISGILKPDKGQILLSSNNIGYCFDALPEPENLTIEQLNTIFTGLLAVWDSDTYF
                     SFVDEFKLPKGKPIGVFSKGMKMQLNVSITLSHNPTLLLLDEVTAGLDPIVRRTVLNTI
                     KEYAISSECIVIMTTHNLEDISDICNRLILLNNGSILLDDNFEDKSSKEIELIFRKTLG
                     YGDM"
     gene            2958..3596
                     /gene="gaaE"
     CDS             2958..3596
                     /codon_start=1
                     /function="unknown"
                     /gene="gaaE"
                     /protein_id="BAG66057.1"
                     /transl_table=11
                     /translation="MKGLVQKDIYQLTSSWFRPVRIFFVIAVLAAGMIFLKQDSSIILV
                     LLLLLMVNNIQSLFIKDSTNRWLSLLKSLKISTFAVIGSRYITLVVICVCGAILNFVYM
                     LFGMLLFNTSTGIDVLVISSICLWVSLIYGLVIIPFLYAFKQNGLTLAIIIMFSCVALL
                     IKFSSAITKLAYIIHSYSYVQLILIAIVALIGIGIISMVVSYLIVEKEK"
ORIGIN
        1 aagggtggag tgcgcttaaa ctgtctgcat tgtgattatt gaccagtgta taagtataga
       61 actaatacac tggtcaataa tcacaatggg tggattgaga ctaagctttc ttgacatttt
      121 tagccgcaga taggctaggt gtcaagagag ctgcgtggtg tacgcgctgc atggtggatt
      181 taaaagggga cagtacgcac tttttagaaa tatgtactat tggtaatatt tggtaagggg
      241 gaatttaatt tacaccaaca ttttggactt gaccaaatta cacagtgaag aaaattctat
      301 tcaaaagata taatataatt aaattgctat agattggaaa tttaacggtg tataaggagg
      361 gaatacgaaa ttgagtaaaa ataagaatta ttttaagtgg atattgggta tatcaagtgc
      421 agtgctaatt ttttatttga gagttttagt atctctcaaa gttgatgata atcagttgaa
      481 gaatattcag gaaaatcaaa ccctattatc ggttttattt accattggac tgttagctat
      541 agtctttttt tcaatccttg gaacatattt tgtatcccta tatatgttaa agaatgtatt
      601 tgacaagacg actatacata ccaaagtaaa attaataatt tataaggtat attttacttg
      661 ttattcaatt tataatctta tttattttat atatatacta atttctaata aactaatgca
      721 accgatggaa cagaactatt tcagtatatt gttatatgtg gctatagcta ttggattata
      781 ttcttcaata agaaagcttg agaagaaaga taccgataag gccttattga tttacacgat
      841 ggtcattttt gttgtcaatt ctattctccc gatattttca cttttaggaa ggtagcatgt
      901 aggtaaataa tctttaagga ggcaaatcag gcatggataa gaaaacaaaa atattatttg
      961 aagtattata cattatctgt ataataggcc ctcaatttat attatttgtg actgcaaaaa
     1021 acaatatgta tcagttggtg ggttcgtttg ttggaatagt atggttttcg tatatttttt
     1081 ggtatatttt tttcaaacaa cataaaaaaa tgtagtatac cacttgttta ttgatttatt
     1141 aagggcttat aatagtgata taatatttat tacaaaaagg tacgtacact cgtaatggat
     1201 ttcctatggg aggaagatac tatggttact aagtacggac gtaatttagg tttgaacaag
     1261 gtagagttgt ttgcaatttg ggcggtttta gtagttgctc ttttattgac cacagcgaac
     1321 atttattgga ttgctgatca attcgggatt catttagcga ctggaacagc ccgtaagtta
     1381 ttagatgcaa tggcttctgg tgcctcattg ggaactgcct ttgctgctat tttgggcgtg
     1441 acattacctg catgggcttt ggcagctgca ggagcattgg gagcgactgc agcctagtga
     1501 ttataaagct ttatgaatag actattcaaa aaaggctaat aggtattaat acctattagc
     1561 ctttttctta ggagacagat ttgattagaa ttaataacgt aaggatacta attccattag
     1621 tcctatttat tggaatactc gttggtgccg gatatgaata ctatagttca ggaaattttc
     1681 aagttgagat gatgaaggaa gtcaatataa atcaattaat ggctctatct agcattatct
     1741 taaaaaatac tgccgcgttc ctattattgg gtttaacatt gattgttgga aaatggttca
     1801 taatactatt ctttttaata aatggattta acataggaat gttcagtgtt catttatcaa
     1861 taattgagtt tatagtattg tttttaccac atggaatttt tgagtatgta gtattctatt
     1921 ctgagagtaa agttttcata atagatttag atggatcgcc tagtaaagct tggttattta
     1981 agcgtttagg ttttatctat ttgggtttag ttttagcagc gttagtggaa gtgtttataa
     2041 caccattaat tgtgcagtac gttatttaag aataagaaag aggtaaaaaa atgcaaaaac
     2101 tattacggat tattgctttg attagtttaa tagctgctat aatatcattc tttatattta
     2161 aaattaatta tataacatat atccttatag gaatatttat tggttctggc ttcatttatc
     2221 aaattagagc acaaggcaga aatagaaagt aacaaaggat aaagggtaga tgttatgaca
     2281 agaaatatgt ttgtagacat taaaaatgtt agcaaaaacc ttactgattt ttcattggaa
     2341 aatctaaaca tcagctttga aaaaggtgaa attattggat tagttggtga aaatggagcc
     2401 ggaaagacta ctttgttaaa cttaatatct ggaatattaa aaccggataa gggacagata
     2461 cttcttagtt ctaataatat tggatattgt tttgatgcat tacctgagcc agaaaattta
     2521 acaatagagc aacttaatac gatatttact ggattactag cagtatggga tagtgatact
     2581 tatttttctt tcgtggatga atttaaatta cctaaaggaa agccaatcgg ggtcttttct
     2641 aaaggaatga aaatgcaatt aaatgtatca ataacgttat cccataatcc tacacttttg
     2701 ctcttagatg aagtcacggc gggattagat ccaatagtgc gaagaactgt actaaataca
     2761 ataaaagaat acgcaatttc atcagagtgt atcgttatta tgacaacaca caacctagag
     2821 gatatttctg atatatgtaa ccgattaatt cttttgaata acggcagcat attgttagat
     2881 gataattttg aggataaaag ttcaaaagaa atagaattaa tctttcgaaa gactttagga
     2941 tatggagata tgtaggcatg aaaggattag tacaaaaaga tatttaccag ttaaccagta
     3001 gctggtttcg tcctgtaagg atattttttg taatagctgt attggctgcg ggtatgattt
     3061 ttttaaaaca agatagttca attattttag ttttattgct gttgttgatg gtgaataata
     3121 ttcaatcatt gtttataaaa gatagtacga acagatggtt atctctactt aaatcgttga
     3181 aaatcagtac atttgctgtt atagggtcac gctatattac attagtagtt atctgcgtat
     3241 gtggtgcaat actcaatttt gtatacatgc tttttggtat gcttttattc aacaccagca
     3301 ctggtattga tgtattagta atcagtagca tatgtttatg ggtatcttta atttatggat
     3361 tagtaataat tccattttta tatgctttta agcaaaatgg gttgactttg gccataatca
     3421 ttatgtttag ctgtgtcgct ttactgataa agttttcttc agcaataact aaattagctt
     3481 atatcataca ttcgtatagt tatgtacagt taattttgat cgcaattgtt gcactgattg
     3541 gcataggaat aatttcaatg gtagtgtcat acttaattgt cgaaaaagaa aagtgatgaa
     3601 agaaccacca aaccattaag ttatgacaca gtttatatat tcatttagcg gacattgacc
     3661 catttattaa taaaaaatgg acttagaatg cgtttctcaa acgtcaaaac atgaagaaac
     3721 gcctatttct aggcgctttt tacgattatt gttgtaaagt ttgttgggct tttttagttc
     3781 ttggcttttt caagtctgga ttagcctttg caaagtattt caaatctttt tgtgtttgct
     3841 gactaatttt tttacgaact tctttaagct gtgtttgcaa atgctggttg ttatctggtt
     3901 cgttgttaat ttgtttattt agatttttat attgttgtga taatccttgt tgtttgttgt
     3961 tgttcaaaat ctttgtgttt tcttggtatg gattgtaaga actaggttta atgtattcat
     4021 cattatataa tccattgaac gtaatgacaa caaccctcat tctgctaatc agtctatttt
     4081 aaagaataat gatccagaac
//
