BGC0000577: sphingonodin II biosynthetic gene cluster from Sphingobium japonicum UT26S
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Location: 68,575 - 77,087 nt. (total: 8,513 nt).
This entry is originally from NCBI GenBank AP010805.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
Genes
RiPP
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000577
Short description sphingonodin II biosynthetic gene cluster from Sphingobium japonicum UT26S
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • RiPP (Lassopeptide)
Loci NCBI GenBank: AP010805.1
Compounds
  • sphingonodin II
Species Sphingobium japonicum UT26S [taxonomy]
References
Chemical products information
sphingonodin II
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • SJA_P1-00920
  • BAI99044.1
 68575 - 71145 (+) TonB-dependent receptor-like protein
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  • SJA_P1-00930
  • BAI99045.1
 71145 - 73388 (+) putative peptidase
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  • SJA_P1-00940
  • BAI99046.1
 73267 - 75012 (-) putative asparagine synthase
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  • SJA_P1-00950
  • BAI99047.1
 75012 - 75665 (-) hypothetical protein
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  • SJA_P1-00960
  • BAI99048.1
 75728 - 75868 (-) hypothetical protein
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  • SJA_P1-00970
  • BAI99049.1
 76044 - 76661 (-) GntR-family transcriptional regulator
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  • SJA_P1-00980
  • BAI99050.1
 76671 - 77087 (-) Xre-family transcriptional regulator
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RiPP-specific information
Subclass Lassopeptide
Cyclic? no
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
Similar known gene clusters
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