BGC0000580: xanthomonin II biosynthetic gene cluster from Xanthomonas gardneri ATCC 19865
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 18,047 - 20,900 nt. (total: 2,854 nt).
This entry is originally from NCBI GenBank AEQX01000392.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000580
Short description xanthomonin II biosynthetic gene cluster from Xanthomonas gardneri ATCC 19865
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • ribosomal (RiPP)
Loci
AEQX01000392.1
18047 - 20900
via
Compounds
  • xanthomonin II
  • xanthomonin I
Species Xanthomonas gardneri ATCC 19865 [taxonomy]
References
Chemical products information
xanthomonin II Evidence: NMR [1]
(no structure information available)
xanthomonin I Evidence: NMR [1]
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • XGA_4058
  • EGD17354.1
 18047 - 18187 (+) Precursor peptide
    copy AA seq
    copy Nt seq
    • XGA_4059
    • EGD17355.1
    		 18236 - 18382 (+) Precursor peptide
      copy AA seq
      copy Nt seq
      • XGA_4060
      • EGD17356.1
      		 18493 - 19167 (+) Lasso peptidase-RRE fusion protein
        copy AA seq
        copy Nt seq
        • XGA_4061
        • EGD17357.1
        		 19167 - 20900 (+) Lasso peptide Cyclase
          copy AA seq
          copy Nt seq
          Biosynthesis information
          Annotation changelog

          Entry version: next

          Date
          Changes
          Submitters
          Reviewers
          2024-04-23
          MIBiG v4 annotathon
          • (ID: G42B4RI57WLTDHDCD4PMU3MJ)
          • (ID: XNMHANLE2XI45CDKHGNZCRRK)
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

          Entry version: 2

          Date
          Changes
          Submitters
          Reviewers
          2019-10-16
          Migrated from v1.4
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

          Entry version: 1

          Date
          Changes
          Submitters
          Reviewers
          2015-06-12
          Submitted
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
          Similar known gene clusters from MIBiG 4.0
          Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
          Click on reference genes to show details of similarities to genes within the current region.
          Click on an accession to open that entry in the MiBIG database.