BGC0000587: microcin H47 biosynthetic gene cluster from Escherichia coli
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 1 - 16,823 nt. (total: 16,823 nt).
This entry is originally from NCBI GenBank AJ009631.3.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000587
Short description microcin H47 biosynthetic gene cluster from Escherichia coli
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • ribosomal (RiPP)
Loci
AJ009631.3
via
Compounds
  • microcin H47
Species Escherichia coli [taxonomy]
References
Chemical products information
microcin H47 Evidence:
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • CAG25570.1
  • mchA
 1763 - 2881 (+) MchA protein
    copy AA seq
    copy Nt seq
    • CAG25571.1
    • mchS1
    		 3030 - 4295 (-) MchS1 protein
      copy AA seq
      copy Nt seq
      • CAG25572.1
      • mchS2
      		 4593 - 4826 (-) MchS2 protein
        copy AA seq
        copy Nt seq
        • CAG25573.1
        • mchS3
        		 4843 - 5277 (-) MchS3 protein
          copy AA seq
          copy Nt seq
          • CAG25574.1
          • mchS4
          		 5432 - 5677 (-) MchS4 protein
            copy AA seq
            copy Nt seq
            • CAB54532.1
            • mchX
            		 5901 - 6020 (+) MchX protein
              copy AA seq
              copy Nt seq
              • CAB54533.1
              • mchI
              		 6089 - 6298 (+) MchI protein
                copy AA seq
                copy Nt seq
                • CAB54534.2
                • mchB
                		 6315 - 6542 (+) MchB protein
                  copy AA seq
                  copy Nt seq
                  • CAJ44956.1
                  • mchC
                  		 6813 - 8363 (+) MchC protein
                    copy AA seq
                    copy Nt seq
                    • CAJ44957.1
                    • mchD
                    		 8389 - 8841 (+) MchD protein
                      copy AA seq
                      copy Nt seq
                      • CAJ44958.1
                      • mchE
                      		 8994 - 10268 (+) MchE protein
                        copy AA seq
                        copy Nt seq
                        • CAJ44959.1
                        • mchF
                        		 10261 - 12357 (+) MchF protein
                          copy AA seq
                          copy Nt seq
                          • CAJ44960.1
                          • mcmI__truncated_
                          		 12393 - 12539 (+) McmI (Microcin M immunity protein) truncated protein
                            copy AA seq
                            copy Nt seq
                            • CAJ44961.1
                            • mcmA__truncated_
                            		 12610 - 12831 (+) McmA (Microcin M precursor) truncated protein
                              copy AA seq
                              copy Nt seq
                              • CAJ44962.1
                              • mcmM__truncated_
                              		 13347 - 13637 (-) McmM (Microcin M-related protein) truncated protein
                                copy AA seq
                                copy Nt seq
                                Biosynthesis information
                                Annotation changelog

                                Entry version: 4

                                Date
                                Changes
                                Submitters
                                Reviewers
                                2022-10-07
                                Update chemical activity to schema version 2.11
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                Entry version: 3

                                Date
                                Changes
                                Submitters
                                Reviewers
                                2022-09-15
                                Updated bioactivity data
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                Entry version: 2

                                Date
                                Changes
                                Submitters
                                Reviewers
                                2019-10-16
                                Migrated from v1.4
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                Entry version: 1

                                Date
                                Changes
                                Submitters
                                Reviewers
                                2015-06-12
                                Submitted
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                Similar known gene clusters from MIBiG 4.0
                                Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                Click on reference genes to show details of similarities to genes within the current region.
                                Click on an accession to open that entry in the MiBIG database.