BGC0000636: carotenoid biosynthetic gene cluster from Brevibacterium linens
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Location: 1 - 14,398 nt. (total: 14,398 nt).
This entry is originally from NCBI GenBank AF139916.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
Genes
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000636
Short description carotenoid biosynthetic gene cluster from Brevibacterium linens
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Terpene
Loci NCBI GenBank: AF139916.1
Compounds
  • carotenoid
Species Brevibacterium linens [taxonomy]
References
Chemical products information
carotenoid
Copy SMILES
C46H90O6
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAF65580.1
 3 - 1373 (+) hypothetical protein
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  • AAF65581.1
  • crtB
 1535 - 2434 (+) phytoene synthase
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  • AAF65582.1
  • crtI
 2431 - 4017 (+) phytoene desaturase
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  • AAF65583.1
 4044 - 4856 (-) hypothetical protein
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  • AAF65584.1
  • cpd1
 4923 - 6386 (-) hypothetical DNA photolyase
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  • AAF65585.1
  • crtK
 6386 - 6904 (-) hypothetical protein
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  • AAF65586.1
  • crtU
 6951 - 8504 (-) betacarotene desaturase
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  • AAF65587.1
  • crtYd
 8501 - 8824 (-) lycopene cyclase
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  • AAF65588.1
  • crtYc
 8814 - 9191 (-) lycopene cyclase
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  • AAF65589.1
 9188 - 10417 (-) hypothetical protein
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  • AAF65590.1
  • crtE
 10414 - 11571 (-) GGPP synthase
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  • AAF65591.1
  • idi
 11471 - 12019 (-) isopentenyl diphosphate isomerase
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  • AAF65592.1
 12190 - 13446 (+) hypothetical protein
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  • AAF65593.1
 13472 - 14167 (+) hypothetical protein
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Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
Similar known gene clusters
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