BGC0000641: carotenoid biosynthetic gene cluster from Enterobacteriaceae bacterium DC416
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 8,675 nt. (total: 8,675 nt).
This entry is originally from NCBI GenBank DQ090835.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000641
Short description carotenoid biosynthetic gene cluster from Enterobacteriaceae bacterium DC416
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • terpene (Unknown)
Loci
DQ090835.1
via
Compounds
  • carotenoid
Species Enterobacteriaceae bacterium DC416 [taxonomy]
References
Chemical products information
carotenoid Evidence:
Copy SMILES
C46H90O6
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAZ73139.1
  • crtE
1209 - 2114 (+) geranylgeranyl pyrophosphate synthase
    copy AA seq
    copy Nt seq
    • AAZ73140.1
    • crtX
    2129 - 3406 (+) zeaxanthin glucosyl transferase
      copy AA seq
      copy Nt seq
      • AAZ73141.1
      • crtY
      3406 - 4572 (+) lycopene cyclase
        copy AA seq
        copy Nt seq
        • AAZ73142.1
        • crtI
        4572 - 6053 (+) phytoene desaturase
          copy AA seq
          copy Nt seq
          • AAZ73143.1
          • crtB
          6050 - 6979 (+) phytoene synthase
            copy AA seq
            copy Nt seq
            • AAZ73144.1
            6918 - 7454 (-) beta-carotene hydroxylase
              copy AA seq
              copy Nt seq
              Biosynthesis information
              Annotation changelog

              Entry version: 2

              Date
              Changes
              Submitters
              Reviewers
              Migrated from v1.4
              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

              Entry version: 1

              Date
              Changes
              Submitters
              Reviewers
              Submitted
              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
              Similar known gene clusters from MIBiG 4.0
              Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
              Click on reference genes to show details of similarities to genes within the current region.
              Click on an accession to open that entry in the MiBIG database.