BGC0000672: phytocassane biosynthetic gene cluster from Oryza sativa Japonica Group
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 22,520,469 - 22,764,099 nt. (total: 243,631 nt).
This entry is originally from NCBI GenBank AP008208.2.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000672
Short description phytocassane biosynthetic gene cluster from Oryza sativa Japonica Group
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Terpene
Loci NCBI GenBank: AP008208.2
Compounds
  • phytocassane
  • oryzalides
Species Oryza sativa Japonica Group [taxonomy]
References
Chemical products information
phytocassane
Copy SMILES
C20H28O3
Chemical database entries
PubCHEM
oryzalides
Copy SMILES
C19H28O4
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • BAF09097.1
  • Os02g0569000
 22520497 - 22522002 (+)
copy AA seq
copy Nt seq
  • BAF09098.1
  • Os02g0569400
 22548341 - 22549843 (+)
copy AA seq
copy Nt seq
  • BAF09099.1
  • Os02g0569900
 22598207 - 22599706 (+)
copy AA seq
copy Nt seq
  • BAF09100.1
  • Os02g0570400
 22623021 - 22630857 (+)
copy AA seq
copy Nt seq
  • BAF09101.1
  • Os02g0570500
 22646083 - 22648877 (+)
copy AA seq
copy Nt seq
  • BAF09102.1
  • Os02g0570700
 22668459 - 22671252 (-)
copy AA seq
copy Nt seq
  • BAH91759.1
  • Os02g0571100
 22699129 - 22705273 (+)
copy AA seq
copy Nt seq
  • BAF09104.1
  • Os02g0571300
 22711663 - 22720012 (-)
copy AA seq
copy Nt seq
  • BAF09105.1
  • Os02g0571800
 22745049 - 22755547 (-)
copy AA seq
copy Nt seq
  • BAF09106.1
  • Os02g0571900
 22762510 - 22764048 (-)
copy AA seq
copy Nt seq
  • BAF09107.1
  • Os02g0572000
 22763201 - 22763554 (+)
copy AA seq
copy Nt seq
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Merge annotations from duplicate entry BGC0002388
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.