BGC0000679 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000679 (Micromonospora sp. M42)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	other,T3PKS	1	47,916	diazepinomicin	terpene	100%

BGC0000679 - Region 1 - T3PKS,other

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Location: 1 - 47,916 nt. (total: 47,916 nt) Show pHMM detection rules used

Region on contig edge.

other: (LmbU or Neocarzinostat or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin or orf2_PTase)
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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TTA codons

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 47,917
Label		BGC0000679

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000679	1.43	Terpene	diazepinomicin	Micromonospora sp. M42
BGC0001848	0.96	Other	diazaquinomycin H, diazaquinomycin J	Micromonospora sp. B006
BGC0002493	0.58	NRP	parabactin	Paracoccus denitrificans PD1222
BGC0000286	0.50	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000649	0.47	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0002474	0.45	NRP	agrobactin	Agrobacterium tumefaciens
BGC0000252	0.44	Polyketide	nonactin	Streptomyces griseus subsp. griseus
BGC0000343	0.43	NRP	enterobactin	Pseudomonas sp. J465
BGC0001594	0.43	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0001444	0.42	Other (shikimate derived)	caboxamycin	Streptomyces sp. NTK 937

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000679	1.00	Terpene	diazepinomicin	Micromonospora sp. M42
BGC0001848	0.74	Other	diazaquinomycin H, diazaquinomycin J	Micromonospora sp. B006
BGC0002493	0.62	NRP	parabactin	Paracoccus denitrificans PD1222
BGC0002284	0.60	Other	corynecin III, corynecin I, corynecin II	Rhodococcus sp. H-CA8f
BGC0000286	0.59	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0001594	0.57	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000649	0.56	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000207	0.56	Polyketide	chartreusin	Streptomyces chartreusis
BGC0002474	0.56	NRP	agrobactin	Agrobacterium tumefaciens
BGC0001444	0.55	Other (shikimate derived)	caboxamycin	Streptomyces sp. NTK 937

Similar known gene clusters from MIBiG 4.0

NRPS/PKS substrates

NRPS/PKS substrate predictions

MCBG_00187

AMP-binding (53..231): X

nrpys: Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: TGAWFGESLK
Nearest Stachelhaus code(s):: nohBza or oh-nitroBza AGAWYAEPLK (71% 8Å match)
Stachelhaus code match:: 60% (weak)