BGC0000688: copalyl diphosphate biosynthetic gene cluster from Diaporthe amygdali
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Location: 1 - 13,785 nt. (total: 13,785 nt).
This entry is originally from NCBI GenBank AB254160.1, but has been modified (see Modifications tab for details).

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
Genes
History
KnownClusterBlast
Modifications
General information about the BGC
MIBiG accession BGC0000688
Short description copalyl diphosphate biosynthetic gene cluster from Diaporthe amygdali
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Terpene
Loci NCBI GenBank: AB254160.1
Compounds
  • copalyl diphosphate
Species Diaporthe amygdali [taxonomy]
References
Chemical products information
copalyl diphosphate
Copy SMILES
C20H36O7P2
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ctg1_orf000000
 697 - 1010 (+)
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  • ctg1_orf00001
 1119 - 1662 (+)
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  • ctg1_orf0002
 1956 - 3975 (-)
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  • ctg1_orf003
 4519 - 6026 (+)
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  • ctg1_orforf04
 6506 - 7216 (-)
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  • ctg1_orf5
 7913 - 12008 (+)
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  • ctg1_orf6
 12741 - 13661 (-)
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Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Removed empty gene annotations
Similar known gene clusters
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Modifications to original record
  • ctg1_orf000000 was added
  • ctg1_orf00001 was added
  • ctg1_orf0002 was added
  • ctg1_orf003 was added
  • ctg1_orforf04 was added
  • ctg1_orf5 was added
  • ctg1_orf6 was added