BGC0000742: capsular polysaccharide biosynthetic gene cluster from Streptococcus agalactiae
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 1 - 2,815 nt. (total: 2,815 nt).
This entry is originally from NCBI GenBank AF332901.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000742
Short description capsular polysaccharide biosynthetic gene cluster from Streptococcus agalactiae
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • saccharide (None)
Loci
AF332901.1
via
Compounds
  • capsular polysaccharide
Species Streptococcus agalactiae [taxonomy]
References
Chemical products information
capsular polysaccharide Evidence:
Copy SMILES
C49H82N2O39
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAL57102.1
  • cpsD
 1 - 126 (+) CpsD
    copy AA seq
    copy Nt seq
    • AAL57103.1
    • cpsE
    		 178 - 1527 (+) CpsE
      copy AA seq
      copy Nt seq
      • AAL57104.1
      • cpsF
      		 1551 - 2000 (+) CpsF
        copy AA seq
        copy Nt seq
        • AAL57105.1
        • cpsG
        		 2000 - 2473 (+) CpsG
          copy AA seq
          copy Nt seq
          • AAL57106.1
          • cpsH
          		 2470 - >2815 (+) CpsH
            copy AA seq
            copy Nt seq
            Biosynthesis information
            Annotation changelog

            Entry version: 2

            Date
            Changes
            Submitters
            Reviewers
            2019-10-16
            Migrated from v1.4
            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

            Entry version: 1

            Date
            Changes
            Submitters
            Reviewers
            2015-06-12
            Submitted
            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
            Similar known gene clusters from MIBiG 4.0
            Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
            Click on reference genes to show details of similarities to genes within the current region.
            Click on an accession to open that entry in the MiBIG database.