BGC0000767: exopolysaccharide biosynthetic gene cluster from Lactobacillus johnsonii
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
View antiSMASH-generated output
Download Cluster GenBank file
Download region SVG
Location: 1 - 24,625 nt. (total: 24,625 nt).
This entry is originally from NCBI GenBank EF138835.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000767
Short description exopolysaccharide biosynthetic gene cluster from Lactobacillus johnsonii
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • saccharide (None)
Loci
EF138835.1
via
Compounds
  • exopolysaccharide
Species Lactobacillus johnsonii [taxonomy]
References
Chemical products information
exopolysaccharide Evidence:
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • NCC2767LJ0002
  • ABM21425.1
 709 - 882 (+) hypothetical protein
    copy AA seq
    copy Nt seq
    • NCC2767LJ0003
    • ABM21426.1
    		 1110 - 2114 (+) eps transcriptional regulator
      copy AA seq
      copy Nt seq
      • NCC2767LJ0004
      • ABM21427.1
      		 2121 - 2984 (+) polymerization and chain length determination protein
        copy AA seq
        copy Nt seq
        • NCC2767LJ0005
        • ABM21428.1
        		 2995 - 3762 (+) polymerization and chain length determination protein
          copy AA seq
          copy Nt seq
          • NCC2767LJ0006
          • ABM21429.1
          		 3769 - 4539 (+) polymerization and chain length determination protein
            copy AA seq
            copy Nt seq
            • NCC2767LJ0007
            • ABM21430.1
            		 4566 - 5243 (+) phospho-glycosyltransferase
              copy AA seq
              copy Nt seq
              • NCC2767LJ0008
              • ABM21431.1
              		 5247 - 6026 (+) glycosyltransferase
                copy AA seq
                copy Nt seq
                • NCC2767LJ0009
                • ABM21432.1
                		 6044 - 7153 (+) glycosyltransferase
                  copy AA seq
                  copy Nt seq
                  • NCC2767LJ0010
                  • ABM21433.1
                  		 7201 - 8271 (+) glycosyltransferase
                    copy AA seq
                    copy Nt seq
                    • NCC2767LJ0011
                    • ABM21434.1
                    		 8278 - 9372 (+) glycosyltransferase
                      copy AA seq
                      copy Nt seq
                      • NCC2767LJ0012
                      • ABM21435.1
                      		 9375 - 10313 (+) glycosyltransferase
                        copy AA seq
                        copy Nt seq
                        • NCC2767LJ0013
                        • ABM21436.1
                        		 10379 - 11614 (+) polymerization and export protein
                          copy AA seq
                          copy Nt seq
                          • NCC2767LJ0014
                          • ABM21437.1
                          		 11639 - 12757 (+) UDP-galactopyranose mutase
                            copy AA seq
                            copy Nt seq
                            • NCC2767LJ0015
                            • ABM21438.1
                            		 12759 - 13649 (+) glycosyltransferase
                              copy AA seq
                              copy Nt seq
                              • NCC2767LJ0016
                              • ABM21439.1
                              		 13651 - 15078 (+) polymerization and export protein
                                copy AA seq
                                copy Nt seq
                                • NCC2767LJ0017
                                • ABM21440.1
                                		 15080 - 16096 (+) membrane protein
                                  copy AA seq
                                  copy Nt seq
                                  • NCC2767LJ0018
                                  • ABM21441.1
                                  		 16118 - 16549 (+) hypothetical protein
                                    copy AA seq
                                    copy Nt seq
                                    • NCC2767LJ0019
                                    • ABM21442.1
                                    		 16605 - 17114 (+) hypothetical protein
                                      copy AA seq
                                      copy Nt seq
                                      • NCC2767LJ0020
                                      • ABM21443.1
                                      		 17990 - 18196 (+) hypothetical protein
                                        copy AA seq
                                        copy Nt seq
                                        • NCC2767LJ0021
                                        • ABM21444.1
                                        		 18361 - 18876 (+) sugar biosynthesis protein
                                          copy AA seq
                                          copy Nt seq
                                          • NCC2767LJ0022
                                          • ABM21445.1
                                          		 18893 - 19879 (+) sugar biosynthesis protein
                                            copy AA seq
                                            copy Nt seq
                                            • NCC2767LJ0023
                                            • ABM21446.1
                                            		 21112 - 21837 (+) hypothetical protein
                                              copy AA seq
                                              copy Nt seq
                                              • NCC2767LJ0024
                                              • ABM21447.1
                                              		 21837 - 22961 (+) transcriptional regulator
                                                copy AA seq
                                                copy Nt seq
                                                Biosynthesis information
                                                Annotation changelog

                                                Entry version: 2

                                                Date
                                                Changes
                                                Submitters
                                                Reviewers
                                                2019-10-16
                                                Migrated from v1.4
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                Entry version: 1

                                                Date
                                                Changes
                                                Submitters
                                                Reviewers
                                                2015-06-12
                                                Submitted
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                Similar known gene clusters from MIBiG 4.0
                                                Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                                Click on reference genes to show details of similarities to genes within the current region.
                                                Click on an accession to open that entry in the MiBIG database.