BGC0000768: gellan polysaccharide biosynthetic gene cluster from Sphingomonas elodea ATCC 31461
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 31,500 nt. (total: 31,500 nt).
This entry is originally from NCBI GenBank AY217008.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000768
Short description gellan polysaccharide biosynthetic gene cluster from Sphingomonas elodea ATCC 31461
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Saccharide
Loci NCBI GenBank: AY217008.1
Compounds
  • gellan polysaccharide
Species Sphingomonas elodea ATCC 31461 [taxonomy]
References
Chemical products information
gellan polysaccharide
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AAP57678.1
  • gyrB
1 - 1191 (+) putative DNA gyrase subunit B
copy AA seq
copy Nt seq
  • AAP57679.1
1329 - 2363 (+) hypothetical protein
copy AA seq
copy Nt seq
  • AAP57680.1
  • fhuA
2535 - 4592 (-) putative ferrichrome-iron receptor
copy AA seq
copy Nt seq
  • AAP57681.1
4642 - 5799 (+) conserved hypothetical protein
copy AA seq
copy Nt seq
  • AAP57682.1
6033 - 6602 (-) putative acetyltransferase
copy AA seq
copy Nt seq
  • AAP57683.1
6589 - 7419 (-) conserved hypothetical protein
copy AA seq
copy Nt seq
  • AAP57684.1
  • gelQ
7538 - 8479 (+) putative rhamnosyl transferase
copy AA seq
copy Nt seq
  • AAP57685.1
  • gelI
8539 - 9441 (-) GelI
copy AA seq
copy Nt seq
  • AAP57686.1
  • gelK
9583 - 10629 (+) beta-1,4-glucuronosyltransferase
copy AA seq
copy Nt seq
  • AAP57687.1
  • gelL
10626 - 11492 (+) glucosyl transferase
copy AA seq
copy Nt seq
  • AAP57688.1
  • gelJ
11543 - 12931 (-) GelJ
copy AA seq
copy Nt seq
  • AAP57689.1
  • gelF
13546 - 14847 (+) GelF
copy AA seq
copy Nt seq
  • AAP57690.1
  • gelD
14862 - 15764 (+) putative polysaccharide export protein
copy AA seq
copy Nt seq
  • AAP57691.1
  • gelC
15800 - 17146 (+) GelC
copy AA seq
copy Nt seq
  • AAP57692.1
  • gelE
17146 - 17853 (+) GelE
copy AA seq
copy Nt seq
  • AAP57693.1
  • gelM
17864 - 18745 (+) GelM
copy AA seq
copy Nt seq
  • AAP57694.1
  • gelN
18729 - 19427 (+) GelN
copy AA seq
copy Nt seq
  • AAP57695.1
  • atrD
19489 - 20883 (-) putative secretion protein
copy AA seq
copy Nt seq
  • AAP57696.1
  • atrB
20880 - 23066 (-) putative secretion protein
copy AA seq
copy Nt seq
  • AAP57697.1
  • gelB
23703 - 25115 (+) glucosyl-isoprenylphosphate transferase
copy AA seq
copy Nt seq
  • AAP57698.1
  • rmlA
25234 - 26112 (+) glucose-1-phosphate thymidylyltransferase
copy AA seq
copy Nt seq
  • AAP57699.1
  • rmlC
26109 - 26675 (+) dTDP-6-deoxy-D-glucose-3,5-epimerase
copy AA seq
copy Nt seq
  • AAP57700.1
  • rmlB
26679 - 27740 (+) dTDP-D-glucose-4,6-dehydratase
copy AA seq
copy Nt seq
  • AAP57701.1
  • rmlD
27740 - 28606 (+) dTDP-6-deoxy-L-mannose-dehydrogenase
copy AA seq
copy Nt seq
  • AAP57702.1
28654 - 29562 (+) conserved hypothetical protein
copy AA seq
copy Nt seq
  • AAP57703.1
29537 - 30166 (-) conserved hypothetical protein
copy AA seq
copy Nt seq
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.