BGC0000777: lipopolysaccharide biosynthetic gene cluster from Escherichia coli
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 11,312 nt. (total: 11,312 nt).
This entry is originally from NCBI GenBank AJ426045.2.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000777
Short description lipopolysaccharide biosynthetic gene cluster from Escherichia coli
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • saccharide (None)
Loci
AJ426045.2
via
Compounds
  • lipopolysaccharide
Species Escherichia coli [taxonomy]
References
Chemical products information
lipopolysaccharide Evidence:
Copy SMILES
C205H366N3O117P5
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • CAD19791.1
  • wzx
357 - 1613 (+) putative O antigen flippase
    copy AA seq
    copy Nt seq
    • wzy
    1613 - 2956 (+)
      copy AA seq
      copy Nt seq
      • CAD19793.1
      2962 - 3822 (+) putative glycosyltransferase
        copy AA seq
        copy Nt seq
        • CAD19794.1
        3819 - 4850 (+) putative glycosyltransferase
          copy AA seq
          copy Nt seq
          • CAD19795.1
          4837 - 5982 (+) putative glycosyltransferase
            copy AA seq
            copy Nt seq
            • CAD19796.1
            5999 - 7006 (+) putative epimerase
              copy AA seq
              copy Nt seq
              • CAD19797.1
              7027 - 8232 (+) putative glycosyltransferase
                copy AA seq
                copy Nt seq
                • CAD19798.1
                • manC
                8210 - 9661 (+) putative mannose-1-phosphate guanosyltransferase
                  copy AA seq
                  copy Nt seq
                  • CAD19799.1
                  • manB
                  9744 - 11114 (+) putative phosphomannomutase
                    copy AA seq
                    copy Nt seq
                    Biosynthesis information
                    Annotation changelog

                    Entry version: 2

                    Date
                    Changes
                    Submitters
                    Reviewers
                    Migrated from v1.4
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                    Entry version: 1

                    Date
                    Changes
                    Submitters
                    Reviewers
                    Submitted
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                    Similar known gene clusters from MIBiG 4.0
                    Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                    Click on reference genes to show details of similarities to genes within the current region.
                    Click on an accession to open that entry in the MiBIG database.