BGC0000837: APE Vf biosynthetic gene cluster from Aliivibrio fischeri ES114
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 928,348 - 946,886 nt. (total: 18,539 nt).
This entry is originally from NCBI GenBank CP000020.2.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000837
Short description APE Vf biosynthetic gene cluster from Aliivibrio fischeri ES114
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: complete
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • other (other)
Loci
CP000020.2
928348 - 946886
via Knock-out studies, Heterologous expression
Compounds
  • APE Vf
Species Aliivibrio fischeri ES114 [taxonomy]
References
Chemical products information
APE Vf Evidence:
Copy SMILES
C22H24O3
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • VF_0841
  • AAW85336.1
928348 - 929580 (-) dehydrogenase
    copy AA seq
    copy Nt seq
    • VF_0842
    • AAW85337.1
    929680 - 930747 (-) putative O-methyltransferase
      copy AA seq
      copy Nt seq
      • VF_0843
      • AAW85338.1
      930851 - 931426 (-) lipoprotein, putative
        copy AA seq
        copy Nt seq
        • VF_0844
        • AAW85339.1
        931556 - 932284 (+) hypothetical protein
          copy AA seq
          copy Nt seq
          • VF_0845
          • AAW85340.1
          932289 - 933086 (+) 1-acyl-sn-glycerol-3-phosphate acyltransferase
            copy AA seq
            copy Nt seq
            • VF_0846
            • AAW85341.1
            933055 - 933351 (+) acyl carrier protein
              copy AA seq
              copy Nt seq
              • VF_0847
              • AAW85342.1
              933363 - 933620 (+) acyl carrier protein
                copy AA seq
                copy Nt seq
                • VF_0848
                • AAW85343.1
                933620 - 934180 (+) DNA gyrase subunit B
                  copy AA seq
                  copy Nt seq
                  • VF_0849
                  • AAW85344.1
                  934141 - 935544 (+) AMP-(fatty)acid ligase
                    copy AA seq
                    copy Nt seq
                    • VF_0850
                    • AAW85345.1
                    935558 - 935932 (+) AMP-(fatty)acid ligase
                      copy AA seq
                      copy Nt seq
                      • VF_0851
                      • AAW85346.1
                      935935 - 937626 (+) predicted acyltransferase
                        copy AA seq
                        copy Nt seq
                        • VF_0852
                        • AAW85347.1
                        937616 - 939151 (+) phenylalanine and histidine ammonia-lyase
                          copy AA seq
                          copy Nt seq
                          • VF_0853
                          • AAW85348.1
                          939163 - 939609 (+) esterase
                            copy AA seq
                            copy Nt seq
                            • VF_0854
                            • AAW85349.1
                            939602 - 940222 (+) hypothetical protein
                              copy AA seq
                              copy Nt seq
                              • VF_0855
                              • AAW85350.1
                              940744 - 942639 (+) transporter
                                copy AA seq
                                copy Nt seq
                                • VF_0856
                                • AAW85351.1
                                942629 - 943255 (+) phospho-N-acetylmuramoyl-pentapeptide- transferase
                                  copy AA seq
                                  copy Nt seq
                                  • VF_0857
                                  • AAW85352.1
                                  943261 - 944448 (+) 3-oxoacyl-(acyl carrier protein) synthase
                                    copy AA seq
                                    copy Nt seq
                                    • VF_0858
                                    • AAW85353.1
                                    944439 - 944909 (+) predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase
                                      copy AA seq
                                      copy Nt seq
                                      • VF_0859
                                      • AAW85354.1
                                      944929 - 945654 (+) 3-oxoacyl-(acyl-carrier-protein) reductase, putative
                                        copy AA seq
                                        copy Nt seq
                                        • VF_0860
                                        • AAW85355.1
                                        945651 - 946886 (+) 3-oxoacyl-(acyl carrier protein) synthase
                                          copy AA seq
                                          copy Nt seq
                                          Biosynthesis information
                                          Annotation changelog

                                          Entry version: 3

                                          Date
                                          Changes
                                          Submitters
                                          Reviewers
                                          Update chemical activity to schema version 2.11
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                          Entry version: 2

                                          Date
                                          Changes
                                          Submitters
                                          Reviewers
                                          Migrated from v1.4
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                          Entry version: 1

                                          Date
                                          Changes
                                          Submitters
                                          Reviewers
                                          Submitted
                                          • (ID: BWBU6RQ63PUYKPLUPLLRC4A7)
                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                          Similar known gene clusters from MIBiG 4.0
                                          Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                          Click on reference genes to show details of similarities to genes within the current region.
                                          Click on an accession to open that entry in the MiBIG database.