BGC0000864 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000864 (Moritella marina ATCC 15381)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	T1PKS,hglE-KS,PUFA	1	41,587	eicosapentaenoic acid-like compound	other:other	100%

BGC0000864 - Region 1 - PUFA,T1PKS,hglE-KS

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Location: 1 - 41,587 nt. (total: 41,587 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
hglE-KS: (hglE or hglD)
PUFA: PUFA_KS

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 41,588
Label		BGC0000864

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000864	2.95	Other	eicosapentaenoic acid-like compound	Moritella marina ATCC 15381
BGC0000863	0.88	Other	eicosapentaenoic acid	Pseudoalteromonas sp. DS-12
BGC0000862	0.88	Other	eicosapentaenoic acid	Shewanella pneumatophori
BGC0000861	0.83	Other	eicosapentaenoic acid	Shewanella sp. BR-2
BGC0002648	0.83	Polyketide	eicosapentaenoic acid	Shewanella sp. N2AIL
BGC0000284	0.77	Polyketide	phenolic lipids	Azotobacter vinelandii DJ
BGC0000869	0.72	Other	heterocyst glycolipids	Nostoc sp. 'Peltigera membranacea cyanobiont'
BGC0000056	0.71	Polyketide	esperamicin	Actinomadura verrucosospora
BGC0001880	0.65	RiPP	scytodecamide	Scytonema sp. UIC 10036
BGC0000044	0.63	Polyketide	dawenol	Stigmatella aurantiaca DW4/3-1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000864	1.00	Other	eicosapentaenoic acid-like compound	Moritella marina ATCC 15381
BGC0000862	0.63	Other	eicosapentaenoic acid	Shewanella pneumatophori
BGC0000863	0.63	Other	eicosapentaenoic acid	Pseudoalteromonas sp. DS-12
BGC0000861	0.61	Other	eicosapentaenoic acid	Shewanella sp. BR-2
BGC0002648	0.61	Polyketide	eicosapentaenoic acid	Shewanella sp. N2AIL
BGC0000284	0.59	Polyketide	phenolic lipids	Azotobacter vinelandii DJ
BGC0000869	0.58	Other	heterocyst glycolipids	Nostoc sp. 'Peltigera membranacea cyanobiont'
BGC0000056	0.57	Polyketide	esperamicin	Actinomadura verrucosospora
BGC0000044	0.55	Polyketide	dawenol	Stigmatella aurantiaca DW4/3-1
BGC0001880	0.55	RiPP	scytodecamide	Scytonema sp. UIC 10036

Similar known gene clusters from MIBiG 4.0

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 0 - 41587:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 0 - 40723:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 0 - 37969:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 4, location 846 - 41587:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

BAA89382.2

PKS_AT (604..904): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; inactive: 66.7%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 89.6
inactive: 40.8
Methoxymalonyl-CoA: 24.8
Methylmalonyl-CoA: 24.0
CHC-CoA: 17.7
fatty_acid: 14.3
Isobutyryl-CoA: 13.9
Benzoyl-CoA: 11.9
trans-1,2-CPDA: 0.0
Propionyl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

BAA89383.1

PKS_AT (508..821): mxmal

ATSignature: (unknown)

No matches above 50%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 10.4
Isobutyryl-CoA: 8.8
trans-1,2-CPDA: 0.0
inactive: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Methylmalonyl-CoA: 0.0
Malonyl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0