BGC0000871 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000871 (Myxococcus xanthus DK 1622)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS-like	1	8,807	VEPE/AEPE/TG-1	other:nucleoside	100%

BGC0000871 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 8,807 nt. (total: 8,807 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 8,808
Label		BGC0000871

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000871	1.00	Other (Nucleoside)	VEPE, AEPE, TG-1	Myxococcus xanthus DK 1622
BGC0001168	0.20	NRP	livipeptin	Streptomyces lividans 1326
BGC0001527	0.17	Other	basidioferrin	Gelatoporia subvermispora
BGC0001641	0.17	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0002135	0.17	NRP	bovienimide A	Xenorhabdus bovienii SS-2004
BGC0002505	0.14	Polyketide, NRP	xenoacremone A	Xenoacremonium sp. BF-2018a
BGC0001160	0.14	Polyketide	1-nonadecene, (14Z)-1,14-nonadecadiene	Synechococcus sp. PCC 7002
BGC0002582	0.13	NRP	guanipiperazine A, guanipiperazine B	Streptomyces chrestomyceticus
BGC0001627	0.13	NRP	isonitrile lipopeptides	Mycobacterium tuberculosis H37Rv
BGC0000131	0.13	Polyketide	pyrrolomycin	Streptomyces sp. UC 11065

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000871	1.00	Other (Nucleoside)	VEPE, AEPE, TG-1	Myxococcus xanthus DK 1622
BGC0001168	0.52	NRP	livipeptin	Streptomyces lividans 1326
BGC0001527	0.48	Other	basidioferrin	Gelatoporia subvermispora
BGC0001641	0.48	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0002135	0.48	NRP	bovienimide A	Xenorhabdus bovienii SS-2004
BGC0002505	0.43	Polyketide, NRP	xenoacremone A	Xenoacremonium sp. BF-2018a
BGC0001160	0.43	Polyketide	1-nonadecene, (14Z)-1,14-nonadecadiene	Synechococcus sp. PCC 7002
BGC0002582	0.42	NRP	guanipiperazine A, guanipiperazine B	Streptomyces chrestomyceticus
BGC0001627	0.42	NRP	isonitrile lipopeptides	Mycobacterium tuberculosis H37Rv
BGC0000131	0.41	Polyketide	pyrrolomycin	Streptomyces sp. UC 11065

Similar known gene clusters from MIBiG 4.0

Module view

Legend

NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 0 - 8807:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

MXAN_1528

AMP-binding (568..998): X

nrpys: (unknown)

SVM prediction details:

NOTE: uncertain match

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Cyclic aliphatic chain (polar NH2 group) (Pro, Hpr)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: EFGV---LMK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)