BGC0000932: tropodithietic acid biosynthetic gene cluster from Phaeobacter inhibens DSM 17395
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Location: 88,772 - 108,389 nt. (total: 19,618 nt).
This entry is originally from NCBI GenBank CP002977.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
Genes
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0000932
Short description tropodithietic acid biosynthetic gene cluster from Phaeobacter inhibens DSM 17395
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • Other
Loci NCBI GenBank: CP002977.1
Compounds
  • tropodithietic acid
  • hydroxytropodithietic acid
Species Phaeobacter inhibens DSM 17395 [taxonomy]
References
Chemical products information
tropodithietic acid
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C8H4O3S2
Chemical database entries
PubCHEM
hydroxytropodithietic acid
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C8H4O4S2
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • PGA1_262p00800
  • AFO93362.1
  • paaZ
 88772 - 90904 (+) phenylacetic acid degradation protein PaaZ
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  • PGA1_262p00810
  • AFO93363.1
  • tdaF
 90939 - 91508 (+) putative flavoprotein, HFCD family
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  • PGA1_262p00820
  • AFO93364.1
 91588 - 92028 (-) hypothetical protein
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  • PGA1_262p00830
  • AFO93365.1
 92033 - 93094 (-) hypothetical protein
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  • PGA1_262p00840
  • AFO93366.1
 93186 - 94511 (-) hypothetical protein
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  • PGA1_262p00850
  • AFO93367.1
 94642 - 96099 (-) putative sodium dependent symporter
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  • PGA1_262p00860
  • AFO93368.1
 96397 - 96855 (+) hypothetical protein
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  • PGA1_262p00870
  • AFO93369.1
 96898 - 98499 (+) ABC transporter, extracellular solute-binding protein
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  • PGA1_262p00880
  • AFO93370.1
 98504 - 99547 (+) ABC transporter, integral inner membrane component
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  • PGA1_262p00890
  • AFO93371.1
 99548 - 100357 (+) ABC transporter, integral inner membrane component
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  • PGA1_262p00900
  • AFO93372.1
 100354 - 101850 (+) ABC transporter, ATP-binding protein
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  • PGA1_262p00910
  • AFO93373.1
 101847 - 102404 (-) putative cation transort protein
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  • PGA1_262p00920
  • AFO93374.1
 102488 - 103174 (-) conserved hypothetical protein, peptidase M23-like protein
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  • PGA1_262p00930
  • AFO93375.1
 103171 - 103752 (-) hypothetical protein
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  • PGA1_262p00940
  • AFO93376.1
  • tdaE
 103793 - 104986 (-) acyl-CoA dehydrogenase TdaE
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  • PGA1_262p00950
  • AFO93377.1
  • tdaD
 105010 - 105426 (-) thioesterase superfamily protein TdaD
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  • PGA1_262p00960
  • AFO93378.1
  • tdaC
 105464 - 106066 (-) prephenate dehydratase TdaC-like protein
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  • PGA1_262p00970
  • AFO93379.1
  • tdaB
 106586 - 107284 (-) putative beta etherase TdaB
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  • PGA1_262p00980
  • AFO93380.1
  • tdaA
 107499 - 108389 (-) transcriptional regulator, LysR family
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Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: 5UL74VURKJ25VSPPPO3H2NYB, no GDPR consent given).
  • Hidden contributor (ID: FXGHY3FQ6PUVIIQ6EB3CJFGW, no GDPR consent given).
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Add new compound structure (SMILES) for tropodithietic acid
  • Linked new PubChem id for tropodithietic acid (pubchem:44632924)
  • Add new compound: hydroxytropodithietic acid
  • Merged annotations from duplicate entry BGC0001362
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
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