BGC0001047: syringolin A biosynthetic gene cluster from Pseudomonas syringae
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Location: 3,503 - 25,621 nt. (total: 22,119 nt).
This entry is originally from NCBI GenBank AJ548826.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
Genes
NRP
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001047
Short description syringolin A biosynthetic gene cluster from Pseudomonas syringae
Status Minimal annotation: no
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP
  • Polyketide
Loci NCBI GenBank: AJ548826.1
Compounds
  • syringolin A
Species Pseudomonas syringae [taxonomy]
References
Chemical products information
syringolin A
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C24H39N5O6
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • CAD70192.1
  • sylA
 3504 - 4220 (+) putative HTH_LUXR domain-containing transcription activator
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  • CAD70193.1
  • sylB
 4372 - 5424 (-) putative desaturase
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  • CAD70194.1
  • sylC
 5628 - 9614 (+) non-ribosomal peptide synthetase
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  • CAD70195.1
  • sylD
 9719 - 22291 (+) non-ribosomal peptide synthetase
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  • CAD70196.1
  • sylE
 22364 - 23599 (+) putative syringolin A exporter
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  • CAD70197.1
 23619 - 24332 (-) hypothetical protein
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  • CAD70198.1
 24428 - >25621 (-) hypothetical protein
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NRP-specific information
Subclass N/A
Cyclic? no
NRP-synthases
Gene Modules
sylC
Module ?
Specificity: valine
Evidence for specificity:
  • Structure-based inference
sylD
Module ?
Specificity: dehydrolysine / lysine
Evidence for specificity:
  • Structure-based inference
  • Homology
Module ?
Specificity: valine
Evidence for specificity:
  • Structure-based inference
Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Added NRP substrate specificities
Detailed domain annotation
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