BGC0001048: tallysomycin A biosynthetic gene cluster from Streptoalloteichus hindustanus
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 80,158 nt. (total: 80,158 nt).
This entry is originally from NCBI GenBank EF032505.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001048
Short description tallysomycin A biosynthetic gene cluster from Streptoalloteichus hindustanus
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: complete
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
  • PKS (Type I)
  • saccharide (hybrid/tailoring)
Loci
EF032505.1
via Knock-out studies
Compounds
  • tallysomycin A
  • tallysomycin B
Species Streptoalloteichus hindustanus [taxonomy]
References
Chemical products information
tallysomycin A Evidence:
Copy SMILES
C68H110N22O27S2
Chemical database entries
PubCHEM
tallysomycin B Evidence:
Copy SMILES
C62H98N20O26S2
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ABL74927.1
1198 - 4902 (+) Orf38
    copy AA seq
    copy Nt seq
    • ABL74928.1
    4902 - 6473 (+) Orf37
      copy AA seq
      copy Nt seq
      • ABL74929.1
      6470 - 7135 (+) Orf36
        copy AA seq
        copy Nt seq
        • ABL74930.1
        7132 - 7875 (+) Orf35
          copy AA seq
          copy Nt seq
          • ABL74931.1
          7872 - 8438 (+) Orf34
            copy AA seq
            copy Nt seq
            • ABL74932.1
            8527 - 9582 (+) Orf33
              copy AA seq
              copy Nt seq
              • ABL74933.1
              9602 - 10963 (-) Orf32
                copy AA seq
                copy Nt seq
                • ABL74934.1
                11023 - 11865 (-) Orf31
                  copy AA seq
                  copy Nt seq
                  • ABL74935.1
                  • tlmT
                  12315 - 14114 (+) ABC multi-drug transport
                  • Transport
                  copy AA seq
                  copy Nt seq
                  • ABL74936.1
                  • tlmX
                  16093 - 22491 (+) NRPS
                  • Scaffold biosynthesis
                  copy AA seq
                  copy Nt seq
                  • ABL74937.1
                  • tlmIX
                  22488 - 25754 (+) NRPS
                  • Scaffold biosynthesis
                  copy AA seq
                  copy Nt seq
                  • ABL74938.1
                  • tlmVIII
                  25751 - 30352 (+) PKS
                  • Scaffold biosynthesis
                  copy AA seq
                  copy Nt seq
                  • ABL74939.1
                  • tlmVII
                  30349 - 33774 (+) NRPS
                  • Scaffold biosynthesis
                  copy AA seq
                  copy Nt seq
                  • ABL74940.1
                  • tlmVI
                  33771 - 41999 (+) NRPS
                  • Scaffold biosynthesis
                  copy AA seq
                  copy Nt seq
                  • ABL74941.1
                  • tlmV
                  41992 - 43812 (+) NRPS
                  • Scaffold biosynthesis
                  copy AA seq
                  copy Nt seq
                  • ABL74942.1
                  • tlmG
                  43812 - 44804 (+) NAD-dependent sugar epimerase
                  • Tailoring
                  copy AA seq
                  copy Nt seq
                  • ABL74943.1
                  • tlmF
                  44797 - 46698 (+) alpha ketoglutarate-dependent hydroxylase
                  • Tailoring
                  copy AA seq
                  copy Nt seq
                  • ABL74944.1
                  46702 - 48588 (+) Gln-dependent amino transferase
                  • Tailoring
                  copy AA seq
                  copy Nt seq
                  • ABL74945.1
                  • tlmIV
                  48585 - 56447 (+) NRPS
                  • Scaffold biosynthesis
                  copy AA seq
                  copy Nt seq
                  • ABL74946.1
                  • tlmIII
                  56552 - 59083 (+) NRPS
                  • Scaffold biosynthesis
                  copy AA seq
                  copy Nt seq
                  • ABL74947.1
                  • tlmR3
                  59080 - 60126 (+) SyrP-like regulatory protein
                  • Regulation
                  copy AA seq
                  copy Nt seq
                  • ABL74948.1
                  • tlmII
                  60123 - 61595 (+) NRPS type II C
                    copy AA seq
                    copy Nt seq
                    • ABL74949.1
                    61599 - 62168 (+) MbtH-like protein
                      copy AA seq
                      copy Nt seq
                      • ABL74950.1
                      • tlmE
                      62186 - 63352 (+) glycosyl transferase
                      • Tailoring
                      • Knock-out
                      copy AA seq
                      copy Nt seq
                      • ABL74951.1
                      • tlmD
                      63349 - 64965 (+) carbamoyltransferase
                      • Tailoring
                      copy AA seq
                      copy Nt seq
                      • ABL74952.1
                      • tlmI
                      64965 - 65234 (+) type II PCP
                        copy AA seq
                        copy Nt seq
                        • ABL74953.1
                        • tlmC
                        65231 - 66727 (+) NTP sugar synthase
                        • Activation / processing
                        copy AA seq
                        copy Nt seq
                        • ABL74954.1
                        66724 - 67998 (+) SAM-dependent oxidase or methyl transferase
                        • Tailoring
                        copy AA seq
                        copy Nt seq
                        • ABL74955.1
                        68022 - 68948 (+) alpha ketoglutarate-dependent hydroxylase
                        • Tailoring
                        copy AA seq
                        copy Nt seq
                        • ABL74956.1
                        • tlmA
                        69009 - 69383 (+) Sh Ble binding protein
                        • Resistance/immunity
                        copy AA seq
                        copy Nt seq
                        • ABL74957.1
                        69452 - 70045 (+) ankyrin-like protein
                          copy AA seq
                          copy Nt seq
                          • ABL74958.1
                          70042 - 70431 (+) peptide deformylase
                            copy AA seq
                            copy Nt seq
                            • ABL74959.1
                            • tlmH
                            70887 - 71861 (+) alpha ketoglutarate-dependent hydroxylas
                            • Tailoring
                            • Knock-out
                            copy AA seq
                            copy Nt seq
                            • ABL74960.1
                            • tlmJ
                            71889 - 73088 (+) aminotransferase
                            • Tailoring
                            copy AA seq
                            copy Nt seq
                            • ABL74961.1
                            • tlmK
                            73120 - 74682 (+) glycosyl transferase
                            • Tailoring
                            • Knock-out
                            copy AA seq
                            copy Nt seq
                            • ABL74962.1
                            • tlmB
                            74732 - 75610 (+) N-acetyl transferase
                            • Resistance/immunity
                            • Other in vivo study
                            copy AA seq
                            copy Nt seq
                            • ABL74963.1
                            • tlmR2
                            75700 - 76899 (-) putative transcription regulator
                            • Regulation
                            copy AA seq
                            copy Nt seq
                            • ABL74964.1
                            • tlmR1
                            77602 - 77964 (+) putative transcription regulator
                            • Regulation
                            copy AA seq
                            copy Nt seq
                            • ABL74965.1
                            77961 - 78443 (+) Orf (-)1
                              copy AA seq
                              copy Nt seq
                              • ABL74966.1
                              78810 - 80111 (+) Orf (-)2
                                copy AA seq
                                copy Nt seq
                                Biosynthesis information

                                Biosynthetic modules

                                Name
                                4
                                Type
                                nrps-type1
                                Genes
                                tlmX
                                Substrates
                                asparagine (evidence: Sequence-based prediction)
                                Integrated Monomers
                                Domains
                                condensation (LCL), adenylation
                                Name
                                5
                                Type
                                nrps-type1
                                Genes
                                tlmX
                                Substrates
                                histidine (evidence: Sequence-based prediction)
                                Integrated Monomers
                                Domains
                                condensation (DCL), adenylation
                                Name
                                6
                                Type
                                nrps-type1
                                Genes
                                tlmIX
                                Substrates
                                alanine (evidence: Sequence-based prediction)
                                Integrated Monomers
                                Domains
                                condensation (LCL), adenylation
                                Name
                                8
                                Type
                                nrps-type1
                                Genes
                                tlmVII
                                Substrates
                                threonine (evidence: Sequence-based prediction)
                                Integrated Monomers
                                Domains
                                condensation (LCL), adenylation
                                Name
                                2
                                Type
                                nrps-type1
                                Genes
                                tlmVI
                                Substrates
                                serine (evidence: Sequence-based prediction)
                                Integrated Monomers
                                Domains
                                condensation (LCL), adenylation
                                Name
                                3
                                Type
                                nrps-type1
                                Genes
                                tlmVI tlmV
                                Substrates
                                asparagine (evidence: Sequence-based prediction)
                                Integrated Monomers
                                Domains
                                condensation (DCL), adenylation
                                Name
                                10
                                Type
                                nrps-type1
                                Genes
                                tlmIV
                                Substrates
                                cysteine (evidence: Sequence-based prediction)
                                Integrated Monomers
                                Domains
                                condensation (Heterocyclization), adenylation
                                Name
                                9
                                Type
                                nrps-type1
                                Genes
                                tlmIV
                                Substrates
                                beta-alanine (evidence: Sequence-based prediction)
                                Integrated Monomers
                                Domains
                                condensation (LCL), adenylation
                                Name
                                7
                                Type
                                pks-modular
                                Genes
                                tlmVIII
                                Substrates
                                Integrated Monomers
                                Domains
                                acyltransferase, ketosynthase, acyltransferase, ketoreductase, carrier (ACP)
                                Annotation changelog

                                Entry version: 4

                                Date
                                Changes
                                Submitters
                                Reviewers
                                Update chemical activity to schema version 2.11
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                Entry version: 3

                                Date
                                Changes
                                Submitters
                                Reviewers
                                Add new compound: tallysomycin B
                                • (ID: 5UL74VURKJ25VSPPPO3H2NYB)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                Corrected NRP module activity
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                Updated bioactivity data
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                Updated NRP substrate specificities
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                Entry version: 2

                                Date
                                Changes
                                Submitters
                                Reviewers
                                Migrated from v1.4
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                Entry version: 1

                                Date
                                Changes
                                Submitters
                                Reviewers
                                Submitted
                                • (ID: E2T2HCM4X7QXVS4LL4JVBPPK)
                                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                Detailed domain annotation
                                Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                A domain glossary is available here, and an explanation of the visualisation is available here.
                                Selected features only
                                Show module domains
                                Similar known gene clusters from MIBiG 4.0
                                Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                Click on reference genes to show details of similarities to genes within the current region.
                                Click on an accession to open that entry in the MiBIG database.