BGC0001055: yersiniabactin biosynthetic gene cluster from Escherichia coli
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Location: 1 - 84,189 nt. (total: 84,189 nt).
This entry is originally from NCBI GenBank AM236324.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
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Gene details
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General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001055
Short description yersiniabactin biosynthetic gene cluster from Escherichia coli
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
  • PKS (Unknown)
Loci
AM236324.1
via
Compounds
  • yersiniabactin
Species Escherichia coli [taxonomy]
References
Chemical products information
yersiniabactin Evidence:
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C21H27N3O4S3
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • eco2001
  • CAJ87567.1
 786 - 1268 (+) hypothetical protein
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    • eco2002
    • CAJ87568.1
    		 1357 - 2088 (+) hypothetical protein
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      • eco2003
      • CAJ87569.1
      		 2261 - 4945 (-) hypothetical protein
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        • eco2004
        • CAJ87570.1
        		 4997 - 5500 (-) hypothetical protein
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          • eco2005
          • CAJ87571.1
          		 5909 - 6787 (+) hypothetical protein
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            • eco2006
            • CAJ87572.1
            		 6878 - 7129 (-) hypothetical protein
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              • eco2007
              • CAJ87573.1
              		 8011 - 8745 (+) putative DNA-binding protein
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                • eco2008
                • CAJ87574.1
                		 8770 - 9570 (+) hypothetical protein
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                  • eco2009
                  • CAJ87575.1
                  		 9847 - 10326 (+) hypothetical protein
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                    • eco2010
                    • CAJ87576.1
                    • c2411
                    		 10484 - 10888 (+) DNA-binding protein H-NS
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                      • eco2011
                      • CAJ87577.1
                      		 10952 - 11332 (-) hypothetical protein
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                        • eco2012
                        • CAJ87578.1
                        		 11411 - 11653 (-) hypothetical protein
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                          • eco2013
                          • CAJ87579.1
                          		 11768 - 12022 (-) hypothetical protein
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                            • eco2014
                            • CAJ87580.1
                            		 12075 - 12377 (-) hypothetical protein
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                              • eco2015
                              • CAJ87581.1
                              • ECs3513
                              		 12447 - 12665 (-) ECs3513 protein
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                                • eco2016
                                • CAJ87582.1
                                		 12881 - 13774 (-) hypothetical protein
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                                  • eco2017
                                  • CAJ87583.1
                                  • yeeI
                                  		 14179 - 14976 (+) putative YeeI protein
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                                    • eco2018
                                    • CAJ87584.1
                                    • int
                                    		 15314 - 16576 (+) putative prophage P4 integrase
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                                      • eco2019
                                      • CAJ87585.1
                                      • ybtS
                                      		 16770 - 18074 (-) putative anthranilate synthase
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                                        • eco2020
                                        • CAJ87586.1
                                        • ybtX
                                        		 18102 - 19382 (-) putative cytoplasmic transmembrane protein
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                                          • eco2021
                                          • CAJ87587.1
                                          • ybtQ
                                          		 19375 - 21177 (-) putative ABC transporter protein
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                                            • eco2022
                                            • CAJ87588.1
                                            • ybtP
                                            		 21164 - 22966 (-) putative inner membrane ABC-transporter
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                                              • eco2023
                                              • CAJ87589.1
                                              • ybtA
                                              		 23133 - 24092 (+) putative AraC type regulator
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                                                • eco2024
                                                • CAJ87590.1
                                                • irp2_HMWP2
                                                		 24283 - 30390 (+) putative peptide synthase
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                                                  • eco2025
                                                  • CAJ87591.1
                                                  • irp1_HMWP1
                                                  		 30478 - 39969 (+) putative peptide/polyketide synthetase
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                                                    • eco2026
                                                    • CAJ87592.1
                                                    		 39966 - 41066 (+) hypothetical protein
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                                                      • eco2027
                                                      • CAJ87593.1
                                                      • ybtT
                                                      		 41078 - 41866 (+) putative thioesterase
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                                                        • eco2028
                                                        • CAJ87594.1
                                                        • ybtE
                                                        		 41870 - 43447 (+) 2,3-dihydroxybenzoate-AMP ligase
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                                                          • eco2029
                                                          • CAJ87595.1
                                                          • psn
                                                          		 43579 - 45600 (+) putative pesticin receptor
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                                                            • eco2030
                                                            • CAJ87596.1
                                                            		 46194 - 47000 (+) hypothetical protein
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                                                              • eco2031
                                                              • CAJ87597.1
                                                              		 47133 - 49091 (+) hypothetical protein
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                                                                • eco2032
                                                                • CAJ87598.1
                                                                		 49219 - 50271 (-) hypothetical protein
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                                                                  • eco2033
                                                                  • CAJ87599.1
                                                                  • shiA
                                                                  		 50586 - 51902 (+) putative transport protein, shikimate
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                                                                    • eco2034
                                                                    • CAJ87600.1
                                                                    • amn
                                                                    		 52004 - 53458 (+) putative AMP nucleosidase
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                                                                      • eco2035
                                                                      • CAJ87601.1
                                                                      		 53801 - 54517 (+) hypothetical protein
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                                                                        • eco2036
                                                                        • CAJ87602.1
                                                                        		 55149 - 56792 (-) hypothetical protein
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                                                                          • eco2037
                                                                          • CAJ87603.1
                                                                          • cbl
                                                                          		 56910 - 57860 (-) putative transcriptional regulator
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                                                                            • eco2038
                                                                            • CAJ87604.1
                                                                            • nac
                                                                            		 57962 - 58879 (-) putative nitrogen assimilation regulatory protein
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                                                                              • eco2039
                                                                              • CAJ87605.1
                                                                              • erfK
                                                                              		 59337 - 60272 (-) putative exported protein ErfK
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                                                                                • eco2040
                                                                                • CAJ87606.1
                                                                                • cobT
                                                                                		 60334 - 61407 (-) putative dimethylbenzimidazol phosphoribosyltransferase
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                                                                                  • eco2041
                                                                                  • CAJ87607.1
                                                                                  • cobS
                                                                                  		 61419 - 62162 (-) putative cobalamin synthase
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                                                                                    • eco2042
                                                                                    • CAJ87608.1
                                                                                    • cobU
                                                                                    		 62159 - 62704 (-) putative cobinamide kinase/cobinamide phosphate guanylyltransferase
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                                                                                      • eco2043
                                                                                      • cbiG
                                                                                      		 62838 - 63275 (-)
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                                                                                        • eco2044
                                                                                        • CAJ87610.1
                                                                                        • pocR
                                                                                        		 63760 - 64674 (-) putative regulatory protein PocR
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                                                                                          • eco2045
                                                                                          • CAJ87611.1
                                                                                          • pduF
                                                                                          		 64877 - 65686 (-) putative propanediol diffusion facilitator
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                                                                                            • eco2046
                                                                                            • CAJ87612.1
                                                                                            • pduA
                                                                                            		 66199 - 66483 (+) putative propanediol utilization protein PduA
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                                                                                              • eco2047
                                                                                              • CAJ87613.1
                                                                                              • pduB
                                                                                              		 66480 - 67292 (+) putative propanediol utilization protein PduB
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                                                                                                • eco2048
                                                                                                • CAJ87614.1
                                                                                                • pduC
                                                                                                		 67311 - 68975 (+) putative glycerol dehydratase large subunit
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                                                                                                  • eco2049
                                                                                                  • CAJ87615.1
                                                                                                  • pduD
                                                                                                  		 68985 - 69653 (+) putative diol dehydratase medium subunit
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                                                                                                    • eco2050
                                                                                                    • CAJ87616.1
                                                                                                    • pduE
                                                                                                    		 69668 - 70186 (+) putative diol dehydratase small subunit
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                                                                                                      • eco2051
                                                                                                      • CAJ87617.1
                                                                                                      • pduG
                                                                                                      		 70196 - 72028 (+) PduG protein
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                                                                                                        • eco2052
                                                                                                        • CAJ87618.1
                                                                                                        • pduH
                                                                                                        		 72018 - 72368 (+) PduH protein
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                                                                                                          • eco2053
                                                                                                          • CAJ87619.1
                                                                                                          • pduJ
                                                                                                          		 72388 - 72663 (+) putative propanediol utilization protein PduJ
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                                                                                                            • eco2054
                                                                                                            • CAJ87620.1
                                                                                                            • pduK
                                                                                                            		 72687 - 73109 (+) putative propanediol utilization protein PduK
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                                                                                                              • eco2055
                                                                                                              • CAJ87621.1
                                                                                                              • pduL
                                                                                                              		 73112 - 73744 (+) PduL protein
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                                                                                                                • eco2056
                                                                                                                • CAJ87622.1
                                                                                                                • pduM
                                                                                                                		 73741 - 74232 (+) PduM protein
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                                                                                                                  • eco2057
                                                                                                                  • CAJ87623.1
                                                                                                                  • pduN
                                                                                                                  		 74236 - 74511 (+) putative propanediol utilization protein PduN
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                                                                                                                    • eco2058
                                                                                                                    • CAJ87624.1
                                                                                                                    • pduO
                                                                                                                    		 74523 - 75530 (+) PduO protein
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                                                                                                                      • eco2059
                                                                                                                      • CAJ87625.1
                                                                                                                      • pduP
                                                                                                                      		 75527 - 76912 (+) putative CoA-dependent propionaldehyde dehydrogenase
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                                                                                                                        • eco2060
                                                                                                                        • CAJ87626.1
                                                                                                                        • pduQ
                                                                                                                        		 76923 - 78035 (+) putative propanol dehydrogenase
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                                                                                                                          • eco2061
                                                                                                                          • CAJ87627.1
                                                                                                                          • pduS
                                                                                                                          		 78032 - 79375 (+) putative cobalamine reductase
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                                                                                                                            • eco2062
                                                                                                                            • CAJ87628.1
                                                                                                                            • pduT
                                                                                                                            		 79378 - 79932 (+) putative propanediol utilization protein PduT
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                                                                                                                              • eco2063
                                                                                                                              • CAJ87629.1
                                                                                                                              • pduU
                                                                                                                              		 79932 - 80282 (+) putative propanediol utilization protein PduU
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                                                                                                                                • eco2064
                                                                                                                                • CAJ87630.1
                                                                                                                                • pduV
                                                                                                                                		 80287 - 80730 (+) putative propanediol utilization protein PduV
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                                                                                                                                  • eco2065
                                                                                                                                  • CAJ87631.1
                                                                                                                                  		 80830 - 81225 (-) hypothetical protein
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                                                                                                                                    • eco2066
                                                                                                                                    • CAJ87632.1
                                                                                                                                    		 81331 - 82389 (-) hypothetical protein
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                                                                                                                                      • eco2067
                                                                                                                                      • CAJ87633.1
                                                                                                                                      • sbmC
                                                                                                                                      		 82587 - 83060 (-) putative DNA gyrase inhibitory protein
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                                                                                                                                        • eco2068
                                                                                                                                        • CAJ87634.1
                                                                                                                                        • ECs2812
                                                                                                                                        		 83179 - >84186 (-) putative penicillin binding protein 6b
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                                                                                                                                          Biosynthesis information
                                                                                                                                          Annotation changelog

                                                                                                                                          Entry version: next

                                                                                                                                          Date
                                                                                                                                          Changes
                                                                                                                                          Submitters
                                                                                                                                          Reviewers
                                                                                                                                          2024-04-19
                                                                                                                                          MIBiG v4 annotathon
                                                                                                                                          • (ID: CVBS4CX3MGQ2Y6Q45INSO263)
                                                                                                                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                                                                                          Entry version: 4

                                                                                                                                          Date
                                                                                                                                          Changes
                                                                                                                                          Submitters
                                                                                                                                          Reviewers
                                                                                                                                          2022-10-07
                                                                                                                                          Update chemical activity to schema version 2.11
                                                                                                                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                                                                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                                                                                          Entry version: 3

                                                                                                                                          Date
                                                                                                                                          Changes
                                                                                                                                          Submitters
                                                                                                                                          Reviewers
                                                                                                                                          2022-09-15
                                                                                                                                          Updated bioactivity data
                                                                                                                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                                                                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                                                                                          Entry version: 2

                                                                                                                                          Date
                                                                                                                                          Changes
                                                                                                                                          Submitters
                                                                                                                                          Reviewers
                                                                                                                                          2019-10-16
                                                                                                                                          Migrated from v1.4
                                                                                                                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                                                                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                                                                                          Entry version: 1

                                                                                                                                          Date
                                                                                                                                          Changes
                                                                                                                                          Submitters
                                                                                                                                          Reviewers
                                                                                                                                          2015-06-12
                                                                                                                                          Submitted
                                                                                                                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                                                                                          • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                                                                                          Detailed domain annotation
                                                                                                                                          Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
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