BGC0001055: yersiniabactin biosynthetic gene cluster from Escherichia coli
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Location: 1 - 84,189 nt. (total: 84,189 nt).
This entry is originally from NCBI GenBank AM236324.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
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History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001055
Short description yersiniabactin biosynthetic gene cluster from Escherichia coli
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP
  • Polyketide
Loci NCBI GenBank: AM236324.1
Compounds
  • yersiniabactin
Species Escherichia coli [taxonomy]
References
Chemical products information
yersiniabactin
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C21H27N3O4S3
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • eco2001
  • CAJ87567.1
 786 - 1268 (+) hypothetical protein
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  • eco2002
  • CAJ87568.1
 1357 - 2088 (+) hypothetical protein
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  • eco2003
  • CAJ87569.1
 2261 - 4945 (-) hypothetical protein
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  • eco2004
  • CAJ87570.1
 4997 - 5500 (-) hypothetical protein
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  • eco2005
  • CAJ87571.1
 5909 - 6787 (+) hypothetical protein
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  • eco2006
  • CAJ87572.1
 6878 - 7129 (-) hypothetical protein
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  • eco2007
  • CAJ87573.1
 8011 - 8745 (+) putative DNA-binding protein
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  • eco2008
  • CAJ87574.1
 8770 - 9570 (+) hypothetical protein
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  • eco2009
  • CAJ87575.1
 9847 - 10326 (+) hypothetical protein
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  • eco2010
  • CAJ87576.1
  • c2411
 10484 - 10888 (+) DNA-binding protein H-NS
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  • eco2011
  • CAJ87577.1
 10952 - 11332 (-) hypothetical protein
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  • eco2012
  • CAJ87578.1
 11411 - 11653 (-) hypothetical protein
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  • eco2013
  • CAJ87579.1
 11768 - 12022 (-) hypothetical protein
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  • eco2014
  • CAJ87580.1
 12075 - 12377 (-) hypothetical protein
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  • eco2015
  • CAJ87581.1
  • ECs3513
 12447 - 12665 (-) ECs3513 protein
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  • eco2016
  • CAJ87582.1
 12881 - 13774 (-) hypothetical protein
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  • eco2017
  • CAJ87583.1
  • yeeI
 14179 - 14976 (+) putative YeeI protein
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  • eco2018
  • CAJ87584.1
  • int
 15314 - 16576 (+) putative prophage P4 integrase
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  • eco2019
  • CAJ87585.1
  • ybtS
 16770 - 18074 (-) putative anthranilate synthase
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  • eco2020
  • CAJ87586.1
  • ybtX
 18102 - 19382 (-) putative cytoplasmic transmembrane protein
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  • eco2021
  • CAJ87587.1
  • ybtQ
 19375 - 21177 (-) putative ABC transporter protein
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  • eco2022
  • CAJ87588.1
  • ybtP
 21164 - 22966 (-) putative inner membrane ABC-transporter
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  • eco2023
  • CAJ87589.1
  • ybtA
 23133 - 24092 (+) putative AraC type regulator
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  • eco2024
  • CAJ87590.1
  • irp2_HMWP2
 24283 - 30390 (+) putative peptide synthase
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  • eco2025
  • CAJ87591.1
  • irp1_HMWP1
 30478 - 39969 (+) putative peptide/polyketide synthetase
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  • eco2026
  • CAJ87592.1
 39966 - 41066 (+) hypothetical protein
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  • eco2027
  • CAJ87593.1
  • ybtT
 41078 - 41866 (+) putative thioesterase
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  • eco2028
  • CAJ87594.1
  • ybtE
 41870 - 43447 (+) 2,3-dihydroxybenzoate-AMP ligase
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  • eco2029
  • CAJ87595.1
  • psn
 43579 - 45600 (+) putative pesticin receptor
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  • eco2030
  • CAJ87596.1
 46194 - 47000 (+) hypothetical protein
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  • eco2031
  • CAJ87597.1
 47133 - 49091 (+) hypothetical protein
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  • eco2032
  • CAJ87598.1
 49219 - 50271 (-) hypothetical protein
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  • eco2033
  • CAJ87599.1
  • shiA
 50586 - 51902 (+) putative transport protein, shikimate
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  • eco2034
  • CAJ87600.1
  • amn
 52004 - 53458 (+) putative AMP nucleosidase
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  • eco2035
  • CAJ87601.1
 53801 - 54517 (+) hypothetical protein
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  • eco2036
  • CAJ87602.1
 55149 - 56792 (-) hypothetical protein
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  • eco2037
  • CAJ87603.1
  • cbl
 56910 - 57860 (-) putative transcriptional regulator
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  • eco2038
  • CAJ87604.1
  • nac
 57962 - 58879 (-) putative nitrogen assimilation regulatory protein
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  • eco2039
  • CAJ87605.1
  • erfK
 59337 - 60272 (-) putative exported protein ErfK
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  • eco2040
  • CAJ87606.1
  • cobT
 60334 - 61407 (-) putative dimethylbenzimidazol phosphoribosyltransferase
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  • eco2041
  • CAJ87607.1
  • cobS
 61419 - 62162 (-) putative cobalamin synthase
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  • eco2042
  • CAJ87608.1
  • cobU
 62159 - 62704 (-) putative cobinamide kinase/cobinamide phosphate guanylyltransferase
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  • eco2043
  • cbiG
 62838 - 63275 (-)
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  • eco2044
  • CAJ87610.1
  • pocR
 63760 - 64674 (-) putative regulatory protein PocR
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  • eco2045
  • CAJ87611.1
  • pduF
 64877 - 65686 (-) putative propanediol diffusion facilitator
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  • eco2046
  • CAJ87612.1
  • pduA
 66199 - 66483 (+) putative propanediol utilization protein PduA
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  • eco2047
  • CAJ87613.1
  • pduB
 66480 - 67292 (+) putative propanediol utilization protein PduB
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  • eco2048
  • CAJ87614.1
  • pduC
 67311 - 68975 (+) putative glycerol dehydratase large subunit
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  • eco2049
  • CAJ87615.1
  • pduD
 68985 - 69653 (+) putative diol dehydratase medium subunit
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  • eco2050
  • CAJ87616.1
  • pduE
 69668 - 70186 (+) putative diol dehydratase small subunit
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  • eco2051
  • CAJ87617.1
  • pduG
 70196 - 72028 (+) PduG protein
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  • eco2052
  • CAJ87618.1
  • pduH
 72018 - 72368 (+) PduH protein
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  • eco2053
  • CAJ87619.1
  • pduJ
 72388 - 72663 (+) putative propanediol utilization protein PduJ
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  • eco2054
  • CAJ87620.1
  • pduK
 72687 - 73109 (+) putative propanediol utilization protein PduK
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  • eco2055
  • CAJ87621.1
  • pduL
 73112 - 73744 (+) PduL protein
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  • eco2056
  • CAJ87622.1
  • pduM
 73741 - 74232 (+) PduM protein
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  • eco2057
  • CAJ87623.1
  • pduN
 74236 - 74511 (+) putative propanediol utilization protein PduN
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  • eco2058
  • CAJ87624.1
  • pduO
 74523 - 75530 (+) PduO protein
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  • eco2059
  • CAJ87625.1
  • pduP
 75527 - 76912 (+) putative CoA-dependent propionaldehyde dehydrogenase
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  • eco2060
  • CAJ87626.1
  • pduQ
 76923 - 78035 (+) putative propanol dehydrogenase
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  • eco2061
  • CAJ87627.1
  • pduS
 78032 - 79375 (+) putative cobalamine reductase
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  • eco2062
  • CAJ87628.1
  • pduT
 79378 - 79932 (+) putative propanediol utilization protein PduT
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  • eco2063
  • CAJ87629.1
  • pduU
 79932 - 80282 (+) putative propanediol utilization protein PduU
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  • eco2064
  • CAJ87630.1
  • pduV
 80287 - 80730 (+) putative propanediol utilization protein PduV
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  • eco2065
  • CAJ87631.1
 80830 - 81225 (-) hypothetical protein
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  • eco2066
  • CAJ87632.1
 81331 - 82389 (-) hypothetical protein
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  • eco2067
  • CAJ87633.1
  • sbmC
 82587 - 83060 (-) putative DNA gyrase inhibitory protein
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  • eco2068
  • CAJ87634.1
  • ECs2812
 83179 - >84186 (-) putative penicillin binding protein 6b
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Annotation changelog
MIBiG version Submitter Notes
1.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
3.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Updated bioactivity data
3.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Update chemical activity to schema version 2.11
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