BGC0001075 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0001075 (Rhodococcus erythropolis)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	arylpolyene	1	17,525	aurachin RE	terpene+PKS	100%

BGC0001075 - Region 1 - arylpolyene

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Location: 1 - 17,525 nt. (total: 17,525 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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Gene overview

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 17,526
Label		BGC0001075

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001075	1.00	Terpene, Polyketide	aurachin RE	Rhodococcus erythropolis
BGC0002099	0.32	RiPP	biarylite-YFH	Planomonospora sp. ID107089
BGC0002084	0.31	RiPP	biarylitide YYH, biarylitide YFH	Planomonospora sp. ID82291
BGC0002631	0.31	RiPP	myxarylin	Pyxidicoccus fallax
BGC0001224	0.23	Other	reductasporine	uncultured bacterium
BGC0000892	0.21	Other	caryoynencin	Burkholderia gladioli BSR3
BGC0001223	0.19	Other	hydroxysporine	uncultured bacterium
BGC0002554	0.19	Alkaloid	carquinostatin A, carquinostatin B	Streptomyces exfoliatus
BGC0001483	0.17	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8
BGC0000678	0.17	Terpene	pentalenolactone	Streptomyces avermitilis MA-4680 = NBRC 14893

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001075	1.00	Terpene, Polyketide	aurachin RE	Rhodococcus erythropolis
BGC0002099	0.65	RiPP	biarylite-YFH	Planomonospora sp. ID107089
BGC0002084	0.65	RiPP	biarylitide YYH, biarylitide YFH	Planomonospora sp. ID82291
BGC0002631	0.64	RiPP	myxarylin	Pyxidicoccus fallax
BGC0001224	0.56	Other	reductasporine	uncultured bacterium
BGC0000892	0.53	Other	caryoynencin	Burkholderia gladioli BSR3
BGC0001223	0.51	Other	hydroxysporine	uncultured bacterium
BGC0002554	0.51	Alkaloid	carquinostatin A, carquinostatin B	Streptomyces exfoliatus
BGC0001483	0.49	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8
BGC0000678	0.49	Terpene	pentalenolactone	Streptomyces avermitilis MA-4680 = NBRC 14893

Similar known gene clusters from MIBiG 4.0

NRPS/PKS substrates

NRPS/PKS substrate predictions

rauF

AMP-binding (32..380): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GGNAVAGIVK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)