BGC0001083: merochlorin A biosynthetic gene cluster from Streptomyces sp. CNH189
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 60,157 nt. (total: 60,157 nt).
This entry is originally from NCBI GenBank JX186999.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001083
Short description merochlorin A biosynthetic gene cluster from Streptomyces sp. CNH189
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: complete
Whether the entry covers everything needed for the pathway producing the compound(s)
Remarks "An unusual terpene cyclization catalyzed by chloroperoxidases not by classic terpene synthase/cyclases"
Biosynthetic class(es)
  • PKS (Type III)
  • terpene (Sesquiterpene)
Loci
JX186999.1
via Knock-out studies, Enzymatic assays, Heterologous expression
Compounds
  • merochlorin A
  • merochlorin B
  • deschloro-merochlorin A
  • deschloro-merochlorin B
  • isochloro-merochlorin B
  • dichloro-merochlorin B
  • merochlorin D
  • merochlorin C
Species Streptomyces sp. CNH189 [taxonomy]
References
Chemical products information
merochlorin A Evidence:
Copy SMILES
C25H31Cl1O4
Chemical database entries
NPAtlas
merochlorin B Evidence:
Copy SMILES
C25H29Cl1O4
Chemical database entries
NPAtlas
deschloro-merochlorin A Evidence:
Copy SMILES
C25H30O4
deschloro-merochlorin B Evidence:
Copy SMILES
C25H30O4
isochloro-merochlorin B Evidence:
Copy SMILES
C25H29Cl1O4
dichloro-merochlorin B Evidence:
Copy SMILES
C25H28Cl2O4
merochlorin D Evidence:
Copy SMILES
C26H33Cl1O5
Chemical database entries
NPAtlas
merochlorin C Evidence:
Copy SMILES
C26H32Cl2O5
Chemical database entries
NPAtlas
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AGH68886.1
  • mcl1
1 - 858 (-) methylenetetrahydrofolate reductase
  • Precursor biosynthesis
copy AA seq
copy Nt seq
  • AGH68887.1
  • mcl2
1096 - 2169 (-) isoprenyl diphosphate synthase
  • Precursor biosynthesis
copy AA seq
copy Nt seq
  • AGH68888.1
  • mcl3
2291 - 3268 (-) ketoacyl-ACP synthase III
  • Precursor biosynthesis
copy AA seq
copy Nt seq
  • AGH68889.1
  • mcl4
3403 - 4578 (-) HMG-CoA synthase
  • Precursor biosynthesis
copy AA seq
copy Nt seq
  • AGH68890.1
  • mcl5
4582 - 5643 (-) HMG-CoA reductase
  • Precursor biosynthesis
copy AA seq
copy Nt seq
  • AGH68891.1
  • mcl6
5636 - 6730 (-) isopentenyldiphosphate isomerase
  • Precursor biosynthesis
copy AA seq
copy Nt seq
  • AGH68892.1
  • mcl7
6727 - 7839 (-) phosphomevalonate kinase
  • Precursor biosynthesis
copy AA seq
copy Nt seq
  • AGH68893.1
  • mcl8
7836 - 8876 (-) mevalonate diphosphate decarboxylase
  • Precursor biosynthesis
copy AA seq
copy Nt seq
  • AGH68894.1
  • mcl9
8866 - 9903 (-) mevalonate kinase
  • Precursor biosynthesis
copy AA seq
copy Nt seq
  • AGH68895.1
  • mcl10
10838 - 11023 (-) MerR-like transcriptional regulator
  • Regulation
copy AA seq
copy Nt seq
  • AGH68896.1
  • mcl11
11020 - 11649 (-) hypothetical protein
    copy AA seq
    copy Nt seq
    • AGH68897.1
    • mcl12
    12224 - 14245 (+) oxidoreductase
      copy AA seq
      copy Nt seq
      • AGH68898.1
      • mcl13
      14242 - 15681 (+) 3-carboxymuconate cycloisomerase
        copy AA seq
        copy Nt seq
        • AGH68899.1
        • mcl14
        16151 - 17692 (+) FAD-dependent oxidoreductase
          copy AA seq
          copy Nt seq
          • AGH68900.1
          • mcl15
          18104 - 19804 (+) cytochrome B-like protein
            copy AA seq
            copy Nt seq
            • AGH68901.1
            • mcl16
            20057 - 20416 (+) hypothetical protein
              copy AA seq
              copy Nt seq
              • AGH68902.1
              • mcl17
              21073 - 22149 (+) type-III polyketide synthase
              • Scaffold biosynthesis
              • Activity assay
              copy AA seq
              copy Nt seq
              • AGH68903.1
              • mcl18
              22146 - 22706 (+) monooxygenase
              • Tailoring
              • Knock-out
              copy AA seq
              copy Nt seq
              • AGH68904.1
              • mcl19
              22712 - 23878 (+) aminotransferase
                copy AA seq
                copy Nt seq
                • AGH68905.1
                • mcl20
                24166 - 25752 (+) AMP-dependent synthetase
                  copy AA seq
                  copy Nt seq
                  • AGH68906.1
                  • mcl21
                  25749 - 26882 (+) methyltransferase
                  • Tailoring
                  • Knock-out
                  copy AA seq
                  copy Nt seq
                  • AGH68907.1
                  • mcl22
                  27097 - 27750 (+) isosesquilavandulyl diphosphate synthase
                  • Precursor biosynthesis
                  • Activity assay
                  copy AA seq
                  copy Nt seq
                  • AGH68908.1
                  • mcl23
                  28223 - 29140 (+) aromatic prenyltransferase
                  • Tailoring
                  • Activity assay
                  copy AA seq
                  copy Nt seq
                  • AGH68909.1
                  • mcl24
                  29301 - 30854 (+) vanadium-dependent chloroperoxidase
                  • Tailoring
                  • Activity assay
                  copy AA seq
                  copy Nt seq
                  • AGH68910.1
                  • mcl25
                  30953 - 32515 (+) MFS-like transporter
                  • Transport
                  copy AA seq
                  copy Nt seq
                  • AGH68911.1
                  • mcl26
                  32659 - 33612 (-) aromatase
                    copy AA seq
                    copy Nt seq
                    • AGH68912.1
                    • mcl27
                    33703 - 34425 (-) thioesterase
                      copy AA seq
                      copy Nt seq
                      • AGH68913.1
                      • mcl28
                      34587 - 35408 (-) SARP-like transcriptional regulator
                      • Regulation
                      copy AA seq
                      copy Nt seq
                      • AGH68914.1
                      • mcl29
                      35748 - 36416 (-) TetR-like transcriptional regulator
                      • Regulation
                      copy AA seq
                      copy Nt seq
                      • AGH68915.1
                      • mcl30
                      36568 - 38886 (-) iron-sulfur-binding oxidoreductase
                        copy AA seq
                        copy Nt seq
                        • AGH68916.1
                        • mcl31
                        39033 - 39902 (-) SARP-like transcriptional regulator
                        • Regulation
                        copy AA seq
                        copy Nt seq
                        • AGH68917.1
                        • mcl32
                        40410 - 41057 (-) TetR-like transcriptional regulator
                        • Regulation
                        copy AA seq
                        copy Nt seq
                        • AGH68918.1
                        • mcl33
                        41565 - 43022 (-) NRPS-like condensation domain
                          copy AA seq
                          copy Nt seq
                          • AGH68919.1
                          • mcl34
                          43295 - 44236 (-) SARP-like transcriptional regulator
                          • Regulation
                          copy AA seq
                          copy Nt seq
                          • AGH68920.1
                          • mcl35
                          44736 - 45551 (+) SARP-like transcriptional regulator
                          • Regulation
                          copy AA seq
                          copy Nt seq
                          • AGH68921.1
                          • mcl36
                          45645 - 46487 (-) SARP-like transcriptional regulator
                          • Regulation
                          copy AA seq
                          copy Nt seq
                          • AGH68922.1
                          • mcl37
                          47593 - 48585 (+) AfsA-like gamma-butyrolactone synthase
                          • Regulation
                          copy AA seq
                          copy Nt seq
                          • AGH68923.1
                          • mcl38
                          48730 - 49494 (+) oxidoreductase
                            copy AA seq
                            copy Nt seq
                            • AGH68924.1
                            • mcl39
                            51650 - 53245 (+) MFS-like transporter
                            • Transport
                            copy AA seq
                            copy Nt seq
                            • AGH68925.1
                            • mcl40
                            54769 - 56364 (+) vanadium-dependent chloroperoxidase
                            • Tailoring
                            • Other in vivo study
                            copy AA seq
                            copy Nt seq
                            • AGH68926.1
                            • mcl41
                            56801 - 57523 (+) thioredoxin-like oxidoreductase
                              copy AA seq
                              copy Nt seq
                              Biosynthesis information

                              Biosynthetic modules

                              Name
                              1
                              Type
                              pks-trans-at
                              Genes
                              mcl17
                              Substrates
                              Integrated Monomers
                              Domains
                              ketosynthase
                              Annotation changelog

                              Entry version: 4

                              Date
                              Changes
                              Submitters
                              Reviewers
                              Update chemical activity to schema version 2.11
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                              Entry version: 3

                              Date
                              Changes
                              Submitters
                              Reviewers
                              Corrected polyketide synthase gene entries
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                              Removed ketoreductase stereochemistry annotation from modules without ketoreductases
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                              Updated bioactivity data
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                              Entry version: 2

                              Date
                              Changes
                              Submitters
                              Reviewers
                              Migrated from v1.4
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                              Updated compound(s) information (NPAtlas curation)
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                              Entry version: 1

                              Date
                              Changes
                              Submitters
                              Reviewers
                              Submitted
                              • (ID: MQCAQSV425YQGLSERITRLP7K)
                              • (ID: 7PXJSJT7IBMNIYLGG3GUM5VC)
                              • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                              Detailed domain annotation
                              Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                              A domain glossary is available here, and an explanation of the visualisation is available here.
                              Selected features only
                              Show module domains
                              Similar known gene clusters from MIBiG 4.0
                              Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                              Click on reference genes to show details of similarities to genes within the current region.
                              Click on an accession to open that entry in the MiBIG database.